Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p24880 Brassica napus HOM05D001670 ORTHO05D002980 1.9e-156 555.8 283 100.0
C04p61850 Brassica napus HOM05D001670 ORTHO05D002980 5.7e-121 438.0 307 77.9
BolC4t27667H Brassica oleracea HOM05D001670 ORTHO05D002980 5.7e-121 438.0 307 77.9
BcaC02g07928 Brassica carinata HOM05D001670 ORTHO05D002980 3.0e-114 415.6 295 76.9
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 2.4e-111 406.0 318 73.3
A09p69240 Brassica napus HOM05D001670 ORTHO05D002980 1.1e-108 397.1 318 72.6
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 1.1e-108 397.1 318 72.6
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 3.6e-107 392.1 322 72.0
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 8.0e-107 391.0 329 69.9
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 2.3e-106 389.4 327 69.7
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 1.2e-105 387.1 328 69.5
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 5.7e-105 384.8 326 69.6
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 1.3e-104 383.6 326 68.7
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 3.7e-104 382.1 326 68.7
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 1.1e-103 380.6 326 68.4
BcaNung05287 Brassica carinata HOM05D001670 ORTHO05D002980 1.4e-103 380.2 326 68.4
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 1.4e-103 380.2 326 68.4
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 3.1e-103 379.0 325 68.9
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 3.1e-103 379.0 325 68.9
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 7.7e-102 374.4 326 68.7
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 1.0e-101 374.0 326 68.4
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 1.3e-101 373.6 326 67.2
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 8.5e-101 370.9 326 67.8
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 1.5e-100 370.2 329 66.3
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 7.2e-100 367.9 325 67.4
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 7.2e-100 367.9 325 67.4
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 4.7e-99 365.2 324 67.0
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 6.3e-96 354.8 244 77.9
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 2.3e-93 346.3 252 75.8
BcaB06g28670 Brassica carinata HOM05D001670 ORTHO05D002980 4.7e-83 312.0 193 86.5
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 3.9e-77 292.4 242 66.1
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 1.1e-76 290.8 236 66.1
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.9e-76 290.0 245 64.9
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 3.3e-76 289.3 245 63.3
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 3.3e-76 289.3 244 64.8
Gohir.A11G078000 Gossypium hirsutum HOM05D001670 ORTHO05D002980 7.3e-76 288.1 242 65.3
Gohir.D11G082400 Gossypium hirsutum HOM05D001670 ORTHO05D002980 9.5e-76 287.7 242 64.9
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 9.5e-76 287.7 242 64.9
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 1.2e-75 287.3 245 65.3
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 2.1e-75 286.6 244 64.3
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 2.8e-75 286.2 233 67.4
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 2.8e-75 286.2 236 66.1
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 3.6e-75 285.8 238 65.5
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 3.6e-75 285.8 242 64.9
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 3.6e-75 285.8 242 64.9
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 6.2e-75 285.0 245 63.3
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 6.2e-75 285.0 244 62.7
Gohir.A12G095700 Gossypium hirsutum HOM05D001670 ORTHO05D002980 8.0e-75 284.6 225 68.0
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 8.0e-75 284.6 247 64.8
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 8.0e-75 284.6 245 62.9
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 1.8e-74 283.5 236 65.3
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 2.3e-74 283.1 236 64.4
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 6.8e-74 281.6 224 67.9
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 8.9e-74 281.2 235 64.3
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 8.9e-74 281.2 239 64.9
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 2.0e-73 280.0 245 62.9
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 3.4e-73 279.3 244 62.3
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 9.8e-73 277.7 239 63.2
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 1.3e-72 277.3 245 64.1
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 2.2e-72 276.6 245 62.9
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 3.7e-72 275.8 245 64.5
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 4.9e-72 275.4 248 61.7
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 6.4e-72 275.0 233 64.8
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 8.3e-72 274.6 244 62.7
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 1.4e-71 273.9 247 62.3
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 1.9e-71 273.5 245 64.1
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.9e-71 273.5 245 64.1
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.9e-71 273.5 245 64.1
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.9e-71 273.5 245 64.1
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 1.9e-71 273.5 245 64.1
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.4e-71 273.1 241 64.7
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 3.2e-71 272.7 241 63.5
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 3.2e-71 272.7 235 63.4
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 3.2e-71 272.7 221 65.6
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 5.4e-71 271.9 228 64.5
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 5.4e-71 271.9 240 62.9
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 7.0e-71 271.6 236 61.9
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 1.2e-70 270.8 237 64.6
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 4.6e-70 268.9 221 66.1
AUR62004150 Chenopodium quinoa HOM05D001670 ORTHO05D002980 1.0e-69 267.7 224 63.8
AUR62013711 Chenopodium quinoa HOM05D001670 ORTHO05D002980 1.3e-69 267.3 224 63.8
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 1.7e-69 266.9 235 62.6
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 2.3e-69 266.5 224 64.7
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 2.3e-69 266.5 228 64.0
Sc13g0006690 Simmondsia chinensis HOM05D001670 ORTHO05D002980 3.0e-69 266.2 246 60.6
ClCG05G000260 Citrullus lanatus HOM05D001670 ORTHO05D002980 3.9e-69 265.8 247 60.3
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 3.9e-69 265.8 247 59.9
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 3.9e-69 265.8 247 60.3
CSS0023490 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 6.6e-69 265.0 227 65.6
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 6.6e-69 265.0 227 65.6
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 8.6e-69 264.6 227 64.3
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 1.1e-68 264.2 235 60.9
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 1.5e-68 263.8 240 61.2
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 1.9e-68 263.5 242 62.8
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 2.1e-67 260.0 247 59.1
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 3.6e-67 259.2 235 60.9
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 3.6e-67 259.2 235 60.9
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 4.7e-67 258.8 228 62.3
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 1.1e-66 257.7 248 55.6
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 1.8e-66 256.9 240 60.0
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.8e-66 256.9 240 59.6
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 2.3e-66 256.5 240 60.4
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 8.9e-66 254.6 248 54.4
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 8.9e-66 254.6 242 58.7
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 1.5e-65 253.8 241 60.2
Hma1.2p1_0341F.1_g130250 Hydrangea macrophylla HOM05D001670 ORTHO05D002980 2.0e-65 253.4 236 58.9
Ah.05g173600 Amaranthus hybridus HOM05D001670 ORTHO05D002980 2.6e-65 253.1 229 61.6
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 4.4e-65 252.3 256 58.6
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 5.8e-65 251.9 243 60.5
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 7.5e-65 251.5 239 59.8
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 9.9e-65 251.1 236 58.9
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 9.9e-65 251.1 249 55.4
Oeu064574.1 Olea europaea HOM05D001670 ORTHO05D002980 1.7e-64 250.4 236 59.7
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 4.9e-64 248.8 248 55.2
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 4.9e-64 248.8 231 61.0
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 1.1e-63 247.7 225 61.3
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 1.1e-63 247.7 215 64.2
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 1.4e-63 247.3 223 57.8
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 2.4e-63 246.5 238 57.6
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 3.2e-63 246.1 236 55.9
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 3.2e-63 246.1 242 57.9
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 5.4e-63 245.4 221 61.1
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 1.0e-61 241.1 243 57.2
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 1.0e-61 241.1 240 59.6
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 3.9e-61 239.2 218 61.5
CDE11G1219 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 3.9e-61 239.2 230 56.1
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 8.6e-61 238.0 227 56.4
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 1.1e-60 237.7 225 57.8
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 9.5e-60 234.6 227 56.4
CARHR248060 Cardamine hirsuta HOM05D001670 ORTHO05D002980 1.6e-59 233.8 183 69.9
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 8.9e-58 228.0 235 57.0
SHI13578 Sapria himalayana HOM05D001670 ORTHO05D002980 4.4e-57 225.7 240 51.7
Pp3c5_6540 Physcomitrium patens HOM05D001670 ORTHO05D002980 1.7e-56 223.8 223 54.3
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 2.9e-56 223.0 247 50.6
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 1.4e-55 220.7 224 55.8
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 5.4e-55 218.8 240 52.5
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 1.6e-54 217.2 229 51.5
Pp3c6_26730 Physcomitrium patens HOM05D001670 ORTHO05D002980 3.5e-54 216.1 236 50.8
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 7.8e-54 214.9 218 51.4
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 3.9e-53 212.6 224 50.9
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 2.5e-52 209.9 235 51.5
CSS0045045 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 3.3e-52 209.5 237 51.9
TAR374G0935 Trochodendron aralioides HOM05D001670 ORTHO05D002980 3.6e-51 206.1 148 73.0
Actinidia24999 Actinidia chinensis HOM05D001670 ORTHO05D002980 1.8e-50 203.8 209 53.6
Haze_02722 Corylus avellana HOM05D001670 ORTHO05D002980 2.0e-49 200.3 148 74.3
CBR_g37673 Chara braunii HOM05D001670 ORTHO05D002980 2.6e-49 199.9 230 51.3
Thecc.03G154200 Theobroma cacao HOM05D001670 ORTHO05D002980 2.6e-49 199.9 245 49.4
GSVIVG01018721001 Vitis vinifera HOM05D001670 ORTHO05D002980 4.9e-48 195.7 190 56.3
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 4.2e-47 192.6 241 46.1
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 7.1e-47 191.8 240 46.2
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 1.0e-45 188.0 234 49.1
Lj7C538G19 Lonicera japonica HOM05D001670 ORTHO05D002980 1.7e-45 187.2 148 69.6
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 1.7e-45 187.2 226 45.1
Glyma.03G118200 Glycine max HOM05D001670 ORTHO05D002980 2.1e-43 180.3 166 59.0
PRCOL_00002164 Prasinoderma coloniale HOM05D001670 ORTHO05D002980 1.1e-39 167.9 230 41.3
Cre14.g632950 Chlamydomonas reinhardtii HOM05D001670 ORTHO05D002980 7.9e-38 161.8 210 44.3
SMO340G0305 Selaginella moellendorffii HOM05D001670 ORTHO05D002980 8.7e-37 158.3 155 54.2
MCO11G155 Micromonas commoda HOM05D001670 ORTHO05D002980 1.3e-35 154.5 193 47.2
Zm00001eb177620 Zea mays HOM05D001670 ORTHO05D002980 5.3e-34 149.1 163 47.2
Cpa.g.sc212.1 Carica papaya HOM05D001670 ORTHO05D002980 9.9e-33 144.8 148 56.8
Lsat_1_v5_gn_4_44320 Lactuca sativa HOM05D001670 ORTHO05D002980 6.0e-30 135.6 180 45.6
ECA234G2815 Erigeron canadensis HOM05D001670 ORTHO05D002980 1.3e-27 127.9 163 46.0
Zm00001eb382550 Zea mays HOM05D001670 ORTHO05D002980 6.2e-27 125.6 131 48.1
Aqoxy1G02768 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 5.8e-25 119.0 121 55.4
Cfa026075 Carpinus fangiana HOM05D001670 ORTHO05D002980 1.4e-23 114.4 179 42.5
Zm00001eb235140 Zea mays HOM05D001670 ORTHO05D002980 1.9e-23 114.0 115 50.4
Os03g0102333 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 3.2e-23 113.2 145 37.9
HanXRQChr16g0519701 Helianthus annuus HOM05D001670 ORTHO05D002980 1.8e-21 107.5 118 49.2
Actinidia00125 Actinidia chinensis HOM05D001670 ORTHO05D002980 3.9e-21 106.3 80 71.2
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 1.3e-19 101.3 140 45.0
Actinidia20646 Actinidia chinensis HOM05D001670 ORTHO05D010670 6.5e-16 89.0 148 41.2
Cpa.g.sc914.1 Carica papaya HOM05D001670 ORTHO05D002980 1.1e-15 88.2 64 71.9
Actinidia12670 Actinidia chinensis HOM05D001670 ORTHO05D002980 3.2e-15 86.7 87 54.0
Actinidia00127 Actinidia chinensis HOM05D001670 ORTHO05D002980 4.6e-14 82.8 130 43.8
MD07G1112600 Malus domestica HOM05D001670 ORTHO05D002980 4.6e-14 82.8 77 58.4
Actinidia20643 Actinidia chinensis HOM05D001670 ORTHO05D010670 1.8e-13 80.9 137 40.9
Zm00001eb308110 Zea mays HOM05D001670 ORTHO05D002980 5.1e-13 79.3 66 57.6
Rhsim03G0123200 Rhododendron simsii HOM05D001670 ORTHO05D002980 1.1e-12 78.2 160 35.0
Zm00001eb208300 Zea mays HOM05D001670 ORTHO05D002980 3.3e-12 76.6 64 57.8
Zm00001eb134440 Zea mays HOM05D001670 ORTHO05D002980 4.3e-12 76.3 64 57.8
AagrBONN_evm.TU.Sc2ySwM_362.1757 Anthoceros agrestis HOM05D001670 ORTHO05D002980 7.4e-12 75.5 206 31.6
Haze_02721 Corylus avellana HOM05D001670 ORTHO05D002980 2.6e-09 67.0 63 52.4
Actinidia20644 Actinidia chinensis HOM05D001670 ORTHO05D015800 7.7e-09 65.5 46 76.1
Lj7C538T12 Lonicera japonica HOM05D001670 ORTHO05D002980 6.1e-06 55.8 64 50.0


User provided reference genes

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