Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p21560 Brassica napus HOM05D004777 ORTHO05D006240 5.2e-66 254.2 127 100.0
A02p21620 Brassica napus HOM05D004777 ORTHO05D006240 4.3e-36 154.8 81 93.8
A02p21700 Brassica napus HOM05D004777 ORTHO05D006240 4.3e-36 154.8 81 93.8
C09p47230 Brassica napus HOM05D004777 ORTHO05D006240 2.4e-34 149.1 222 48.2
BcaC04g20152 Brassica carinata HOM05D004777 ORTHO05D006240 2.0e-33 146.0 155 58.7
A05p44530 Brassica napus HOM05D004777 ORTHO05D006240 2.0e-33 146.0 238 44.1
C09p75120 Brassica napus HOM05D004777 ORTHO05D006240 2.0e-33 146.0 238 44.1
BraA05t23204Z Brassica rapa HOM05D004777 ORTHO05D006240 2.0e-33 146.0 238 44.1
Sp3g00590 Schrenkiella parvula HOM05D004777 ORTHO05D006240 3.4e-33 145.2 238 43.7
BolC5t35152H Brassica oleracea HOM05D004777 ORTHO05D006240 2.2e-32 142.5 238 43.7
AT3G01480 Arabidopsis thaliana HOM05D004777 ORTHO05D006240 8.4e-32 140.6 238 42.9
Atru.BG.27.p Acer truncatum HOM05D004777 ORTHO05D006240 1.1e-31 140.2 235 42.1
HanXRQChr17g0547881 Helianthus annuus HOM05D004777 ORTHO05D006240 1.4e-31 139.8 238 40.8
QL02p076729 Quercus lobata HOM05D004777 ORTHO05D006240 1.9e-31 139.4 238 40.8
TWI56G1110 Tripterygium wilfordii HOM05D004777 ORTHO05D006240 1.9e-31 139.4 238 41.2
TAR622G1080 Trochodendron aralioides HOM05D004777 ORTHO05D006240 1.9e-31 139.4 238 41.2
Rhsim08G0055400 Rhododendron simsii HOM05D004777 ORTHO05D006240 2.4e-31 139.0 238 41.6
vmacro18239 Vaccinium macrocarpon HOM05D004777 ORTHO05D006240 2.4e-31 139.0 238 41.6
Zm00001eb042520 Zea mays HOM05D004777 ORTHO05D006240 2.4e-31 139.0 238 40.8
Duzib147G0776 Durio zibethinus HOM05D004777 ORTHO05D006240 3.2e-31 138.7 238 40.8
Gohir.A09G026100 Gossypium hirsutum HOM05D004777 ORTHO05D006240 3.2e-31 138.7 238 41.2
PGSC0003DMG401000527 Solanum tuberosum HOM05D004777 ORTHO05D006240 3.2e-31 138.7 238 40.8
Carub.0003s0061 Capsella rubella HOM05D004777 ORTHO05D006240 4.2e-31 138.3 238 42.0
Cpa.g.sc186.15 Carica papaya HOM05D004777 ORTHO05D006240 4.2e-31 138.3 238 41.2
Migut.H00126 Erythranthe guttata HOM05D004777 ORTHO05D006240 4.2e-31 138.3 237 40.9
Prupe.3G283500 Prunus persica HOM05D004777 ORTHO05D006240 4.2e-31 138.3 238 42.0
Solyc02g086910.4 Solanum lycopersicum HOM05D004777 ORTHO05D006240 4.2e-31 138.3 238 40.8
MD09G1035000 Malus domestica HOM05D004777 ORTHO05D006240 5.5e-31 137.9 238 41.6
HPP92_019963 Vanilla planifolia HOM05D004777 ORTHO05D006240 5.5e-31 137.9 212 43.9
Duzib187G0683 Durio zibethinus HOM05D004777 ORTHO05D006240 7.1e-31 137.5 238 40.8
Sopen02g031680 Solanum pennellii HOM05D004777 ORTHO05D006240 7.1e-31 137.5 238 39.9
Gorai.006G029700 Gossypium raimondii HOM05D004777 ORTHO05D006240 9.3e-31 137.1 238 40.8
Oeu043064.1 Olea europaea HOM05D004777 ORTHO05D006240 9.3e-31 137.1 238 40.8
AL3G10690 Arabidopsis lyrata HOM05D004777 ORTHO05D006240 1.2e-30 136.7 238 42.4
Os08g0382400 Oryza sativa ssp. japonica HOM05D004777 ORTHO05D006240 1.2e-30 136.7 238 40.3
CSS0014615 Camellia sinensis var. sinensis HOM05D004777 ORTHO05D006240 1.6e-30 136.3 238 40.8
CiPaw.03G037400 Carya illinoinensis HOM05D004777 ORTHO05D006240 1.6e-30 136.3 238 40.3
MD17G1035100 Malus domestica HOM05D004777 ORTHO05D006240 1.6e-30 136.3 238 41.2
PGR142G2638 Punica granatum HOM05D004777 ORTHO05D006240 1.6e-30 136.3 238 40.3
Actinidia16931 Actinidia chinensis HOM05D004777 ORTHO05D006240 2.1e-30 136.0 237 40.5
Gohir.D09G025500 Gossypium hirsutum HOM05D004777 ORTHO05D006240 2.1e-30 136.0 238 40.3
SGA_v2.0_scaffold135G34858 Striga asiatica HOM05D004777 ORTHO05D006240 2.7e-30 135.6 238 40.3
THA.LOC104802404 Tarenaya hassleriana HOM05D004777 ORTHO05D006240 2.7e-30 135.6 238 40.3
Thecc.04G008400 Theobroma cacao HOM05D004777 ORTHO05D006240 2.7e-30 135.6 238 40.3
MELO3C009952.2 Cucumis melo HOM05D004777 ORTHO05D006240 3.5e-30 135.2 238 40.3
TAR374G0088 Trochodendron aralioides HOM05D004777 ORTHO05D006240 3.5e-30 135.2 238 39.9
CARHR075480 Cardamine hirsuta HOM05D004777 ORTHO05D006240 4.6e-30 134.8 238 41.6
CsaV3_3G042370 Cucumis sativus L. HOM05D004777 ORTHO05D006240 4.6e-30 134.8 238 39.9
Nn4g22807 Nelumbo nucifera HOM05D004777 ORTHO05D006240 4.6e-30 134.8 238 40.3
Ciclev10015286m.g Citrus clementina HOM05D004777 ORTHO05D006240 7.9e-30 134.0 238 40.8
Aa31LG5G10580 Aethionema arabicum HOM05D004777 ORTHO05D006240 1.3e-29 133.3 251 39.8
Aqoxy3G01003 Aquilegia oxysepala HOM05D004777 ORTHO05D006240 1.3e-29 133.3 238 39.5
Dinv33499 Davidia involucrata HOM05D004777 ORTHO05D006240 1.3e-29 133.3 239 40.2
Peaxi162Scf00129g01038 Petunia axillaris HOM05D004777 ORTHO05D006240 1.3e-29 133.3 238 40.3
Nitab4.5_0003337g0100 Nicotiana tabacum HOM05D004777 ORTHO05D006240 1.8e-29 132.9 238 39.9
Sabra16G0231000 Salix brachista HOM05D004777 ORTHO05D006240 1.8e-29 132.9 238 39.5
ClCG10G014260 Citrullus lanatus HOM05D004777 ORTHO05D006240 2.3e-29 132.5 238 39.1
AUR62043215 Chenopodium quinoa HOM05D004777 ORTHO05D006240 3.0e-29 132.1 238 39.5
Lalb_Chr21g0319421 Lupinus albus HOM05D004777 ORTHO05D006240 3.0e-29 132.1 235 40.0
Phvul.004G017000 Phaseolus vulgaris HOM05D004777 ORTHO05D006240 3.0e-29 132.1 235 40.0
VMungo0464G0641 Vigna mungo HOM05D004777 ORTHO05D006240 3.0e-29 132.1 235 40.0
ECA246G3514 Erigeron canadensis HOM05D004777 ORTHO05D006240 3.9e-29 131.7 238 39.1
Eucgr.I01816 Eucalyptus grandis HOM05D004777 ORTHO05D006240 3.9e-29 131.7 238 39.1
Glyma.13G169500 Glycine max HOM05D004777 ORTHO05D006240 3.9e-29 131.7 235 40.0
CANSAT64G2847 Cannabis sativa HOM05D004777 ORTHO05D006240 5.1e-29 131.3 238 39.5
DCAR_011208 Daucus carota HOM05D004777 ORTHO05D006240 5.1e-29 131.3 238 39.5
Potri.001G351400 Populus trichocarpa HOM05D004777 ORTHO05D006240 5.1e-29 131.3 238 39.5
FvH4_6g50590 Fragaria vesca HOM05D004777 ORTHO05D006240 6.7e-29 131.0 238 39.1
FAN05G4199 Fragaria x ananassa HOM05D004777 ORTHO05D006240 6.7e-29 131.0 238 39.1
FAN09G3008 Fragaria x ananassa HOM05D004777 ORTHO05D006240 6.7e-29 131.0 238 39.1
FAN14G1693 Fragaria x ananassa HOM05D004777 ORTHO05D006240 6.7e-29 131.0 238 39.1
FAN14G5049 Fragaria x ananassa HOM05D004777 ORTHO05D006240 6.7e-29 131.0 238 39.1
Lj2g0000040 Lotus japonicus HOM05D004777 ORTHO05D006240 6.7e-29 131.0 235 39.6
MBI10_g11072_MAGBIO Magnolia biondii HOM05D004777 ORTHO05D006240 6.7e-29 131.0 247 39.7
CSS0014422 Camellia sinensis var. sinensis HOM05D004777 ORTHO05D006240 8.7e-29 130.6 253 38.3
AUR62035505 Chenopodium quinoa HOM05D004777 ORTHO05D006240 8.7e-29 130.6 238 39.1
Gohir.D07G226300 Gossypium hirsutum HOM05D004777 ORTHO05D006240 8.7e-29 130.6 238 39.5
Gorai.001G261200 Gossypium raimondii HOM05D004777 ORTHO05D006240 8.7e-29 130.6 238 39.5
Lj7A591G73 Lonicera japonica HOM05D004777 ORTHO05D006240 8.7e-29 130.6 238 39.1
Lju41A35T60 Lonicera japonica HOM05D004777 ORTHO05D006240 8.7e-29 130.6 238 39.1
Lalb_Chr06g0176061 Lupinus albus HOM05D004777 ORTHO05D006240 8.7e-29 130.6 235 40.0
Manes.15G183100 Manihot esculenta HOM05D004777 ORTHO05D006240 8.7e-29 130.6 238 39.1
Nitab4.5_0005176g0090 Nicotiana tabacum HOM05D004777 ORTHO05D006240 8.7e-29 130.6 238 39.1
GSVIVG01032488001 Vitis vinifera HOM05D004777 ORTHO05D006240 8.7e-29 130.6 238 39.5
Ah.04g163480 Amaranthus hybridus HOM05D004777 ORTHO05D006240 1.1e-28 130.2 238 39.5
Medtr6g007607 Medicago truncatula HOM05D004777 ORTHO05D006240 1.1e-28 130.2 235 40.0
Hund02275 Selenicereus undatus HOM05D004777 ORTHO05D006240 1.1e-28 130.2 238 38.7
TPR.G2322 Trifolium pratense HOM05D004777 ORTHO05D006240 1.1e-28 130.2 235 40.4
MSTRG.3173 Avicennia marina HOM05D004777 ORTHO05D006240 1.5e-28 129.8 238 38.7
Hma1.2p1_0802F.1_g220410 Hydrangea macrophylla HOM05D004777 ORTHO05D006240 1.5e-28 129.8 238 39.5
Psat1g057880 Pisum sativum HOM05D004777 ORTHO05D006240 1.9e-28 129.4 235 40.0
Cc07_g02330 Coffea canephora HOM05D004777 ORTHO05D006240 2.5e-28 129.0 238 38.2
Sed0004879 Sechium edule HOM05D004777 ORTHO05D006240 4.3e-28 128.3 238 37.8
Glyma.19G009700 Glycine max HOM05D004777 ORTHO05D006240 7.4e-28 127.5 235 39.1
Lsat_1_v5_gn_0_26221 Lactuca sativa HOM05D004777 ORTHO05D006240 9.6e-28 127.1 210 41.0
EL10Ac4g08570 Beta vulgaris HOM05D004777 ORTHO05D006240 2.1e-27 125.9 238 38.2
Ca_04203_v3 Cicer arietinum L. HOM05D004777 ORTHO05D006240 2.8e-27 125.6 253 37.2
PSO478G4796 Papaver somniferum HOM05D004777 ORTHO05D006240 3.7e-27 125.2 236 38.6
ATR0730G054 Amborella trichopoda HOM05D004777 ORTHO05D006240 1.4e-26 123.2 238 37.8
PSO017G2091 Papaver somniferum HOM05D004777 ORTHO05D006240 1.4e-26 123.2 236 38.1
Potri.017G072800 Populus trichocarpa HOM05D004777 ORTHO05D006240 1.4e-26 123.2 238 37.4
Sabra17G0060200 Salix brachista HOM05D004777 ORTHO05D006240 5.3e-26 121.3 238 37.0
unitig_21.g20495 Utricularia gibba HOM05D004777 ORTHO05D006240 9.0e-26 120.6 237 37.6
SEGI_33645 Sequoiadendron giganteum HOM05D004777 ORTHO05D006240 1.3e-24 116.7 237 36.3
FAN14G3936 Fragaria x ananassa HOM05D004777 ORTHO05D006240 1.7e-24 116.3 235 36.6
COL.COLO4_28942 Corchorus olitorius HOM05D004777 ORTHO05D006240 2.9e-24 115.5 212 39.2
Gohir.A07G219400 Gossypium hirsutum HOM05D004777 ORTHO05D006240 3.8e-24 115.2 222 37.4
BcaC09g47657 Brassica carinata HOM05D004777 ORTHO05D006240 3.2e-23 112.1 208 39.4
CAN.G206.34 Capsicum annuum HOM05D004777 ORTHO05D006240 4.2e-23 111.7 208 38.5
BcaB08g36813 Brassica carinata HOM05D004777 ORTHO05D006240 7.1e-23 110.9 139 53.2
RcHm_v2.0_Chr2g0171381 Rosa chinensis HOM05D004777 ORTHO05D006240 1.2e-22 110.2 208 38.5
Pp3c15_550 Physcomitrium patens HOM05D004777 ORTHO05D006240 1.6e-22 109.8 234 35.0
Thhalv10020775m.g Eutrema salsugineum HOM05D004777 ORTHO05D006240 4.6e-22 108.2 104 62.5
CBR_g37206 Chara braunii HOM05D004777 ORTHO05D006240 1.0e-21 107.1 239 33.9
BolC2t09566H Brassica oleracea HOM05D004777 ORTHO05D022002 1.8e-21 106.3 148 49.3
AagrBONN_evm.TU.Sc2ySwM_368.1753 Anthoceros agrestis HOM05D004777 ORTHO05D006240 3.0e-21 105.5 236 33.5
arahy.Tifrunner.gnm1.ann1.8Y3CFZ Arachis hypogaea HOM05D004777 ORTHO05D006240 1.1e-20 103.6 208 38.5
arahy.Tifrunner.gnm1.ann1.8ZV6UW Arachis hypogaea HOM05D004777 ORTHO05D006240 1.1e-20 103.6 208 38.5
Pp3c9_660 Physcomitrium patens HOM05D004777 ORTHO05D006240 1.5e-20 103.2 234 34.2
BolC3t20605H Brassica oleracea HOM05D004777 ORTHO05D022002 4.3e-20 101.7 149 47.7
CDE02G3984 Ceratophyllum demersum HOM05D004777 ORTHO05D006240 5.7e-20 101.3 103 57.3
Mapoly0001s0360 Marchantia polymorpha HOM05D004777 ORTHO05D006240 7.4e-20 100.9 237 33.3
Sc16g0005400 Simmondsia chinensis HOM05D004777 ORTHO05D006240 1.6e-19 99.8 104 55.8
Haze_14664 Corylus avellana HOM05D004777 ORTHO05D006240 3.7e-19 98.6 339 28.6
SalBow1G4936 Salvia bowleyana HOM05D004777 ORTHO05D006240 6.3e-19 97.8 104 55.8
BolC6t35260H Brassica oleracea HOM05D004777 ORTHO05D022002 6.9e-18 94.4 132 48.5
BolC9t57578H Brassica oleracea HOM05D004777 ORTHO05D006240 4.5e-17 91.7 55 81.8
Pp3c26_630 Physcomitrium patens HOM05D004777 ORTHO05D006240 1.7e-16 89.7 234 30.8
BcaC01g04837 Brassica carinata HOM05D004777 ORTHO05D006240 1.4e-15 86.7 187 36.4
HPP92_019953 Vanilla planifolia HOM05D004777 ORTHO05D006240 7.2e-15 84.3 192 34.9
Cre03.g189800 Chlamydomonas reinhardtii HOM05D004777 ORTHO05D006240 1.4e-13 80.1 236 29.7
BolC9t57579H Brassica oleracea HOM05D004777 ORTHO05D006240 1.8e-13 79.7 48 89.6
SMO146G0026 Selaginella moellendorffii HOM05D004777 ORTHO05D006240 1.9e-12 76.3 95 49.5
C07p00420 Brassica napus HOM05D004777 ORTHO05D022002 8.2e-11 70.9 111 43.2
MCO01G434 Micromonas commoda HOM05D004777 ORTHO05D006240 8.2e-11 70.9 112 40.2
A09p42100 Brassica napus HOM05D004777 ORTHO05D022002 1.6e-06 56.6 41 73.2


User provided reference genes

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