Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 9.3e-123 443.7 255 100.0
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 9.3e-123 443.7 255 100.0
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 1.8e-113 412.9 255 85.5
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 1.4e-107 393.3 257 90.7
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 5.0e-100 368.2 252 75.4
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 9.4e-99 364.0 255 77.3
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 9.4e-99 364.0 184 95.7
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 1.4e-97 360.1 255 74.1
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 3.9e-97 358.6 255 74.5
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 1.1e-94 350.5 253 74.3
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 1.3e-84 317.0 255 69.8
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 2.2e-84 316.2 259 64.9
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 1.7e-76 290.0 276 64.1
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 8.0e-74 281.2 138 97.1
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 2.0e-72 276.6 209 64.6
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 2.6e-72 276.2 209 65.1
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.4e-72 275.8 196 67.3
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 3.4e-72 275.8 212 65.1
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 5.7e-72 275.0 209 64.6
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 5.7e-72 275.0 258 57.0
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 5.7e-72 275.0 205 65.4
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 5.7e-72 275.0 205 65.4
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 7.5e-72 274.6 209 64.1
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 9.8e-72 274.2 191 67.0
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.3e-71 273.9 255 55.7
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 1.3e-71 273.9 255 55.7
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 1.3e-71 273.9 259 56.4
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.7e-71 273.5 194 67.0
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.7e-71 273.5 258 57.0
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 2.2e-71 273.1 263 55.5
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 2.8e-71 272.7 195 67.7
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 2.8e-71 272.7 257 56.0
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 6.3e-71 271.6 215 64.7
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 6.3e-71 271.6 192 69.3
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 1.8e-70 270.0 256 56.6
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 3.2e-70 269.2 209 63.6
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 4.1e-70 268.9 192 68.8
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 7.0e-70 268.1 209 63.6
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 7.0e-70 268.1 212 63.7
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 9.2e-70 267.7 212 63.7
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 2.7e-69 266.2 201 64.2
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 2.7e-69 266.2 192 67.7
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 3.5e-69 265.8 211 64.5
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 1.7e-68 263.5 197 67.0
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 3.9e-68 262.3 249 55.4
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 5.0e-68 261.9 195 66.2
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 6.6e-68 261.5 207 62.8
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 8.6e-68 261.2 213 62.0
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 8.6e-68 261.2 211 62.1
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 8.6e-68 261.2 192 64.1
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 2.5e-67 259.6 196 63.8
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 3.3e-67 259.2 270 51.9
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 4.3e-67 258.8 180 67.8
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 5.6e-67 258.5 212 60.8
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 5.6e-67 258.5 244 56.1
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 9.5e-67 257.7 215 60.9
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.2e-66 257.3 270 51.5
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 1.6e-66 256.9 199 62.8
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 2.1e-66 256.5 199 62.8
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 2.1e-66 256.5 193 64.8
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 2.8e-66 256.1 206 59.7
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 3.6e-66 255.8 193 64.8
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.6e-66 255.8 206 59.7
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 4.7e-66 255.4 212 60.8
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 1.0e-65 254.2 216 58.8
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 1.4e-65 253.8 196 63.3
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 1.8e-65 253.4 214 61.2
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 2.3e-65 253.1 227 57.7
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 3.1e-65 252.7 195 64.1
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 3.1e-65 252.7 195 63.1
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 5.2e-65 251.9 195 64.1
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 1.2e-64 250.8 211 60.2
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.0e-64 250.0 249 51.8
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 4.4e-64 248.8 250 52.4
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 5.8e-64 248.4 206 60.7
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 9.8e-64 247.7 193 62.7
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 9.8e-64 247.7 204 62.3
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 1.7e-63 246.9 198 61.6
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 2.2e-63 246.5 211 59.2
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 6.4e-63 245.0 206 58.3
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 1.9e-62 243.4 215 56.7
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 7.0e-62 241.5 230 54.8
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 3.5e-61 239.2 205 57.6
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 6.0e-61 238.4 199 57.3
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 1.5e-59 233.8 203 56.7
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.9e-59 233.4 279 47.0
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 2.8e-58 229.6 205 57.1
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 6.2e-58 228.4 208 54.3
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 1.4e-57 227.3 206 57.8
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 1.4e-57 227.3 192 56.8
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 3.1e-57 226.1 350 40.3
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 4.0e-57 225.7 217 54.8
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 4.9e-55 218.8 200 54.5
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 6.0e-53 211.8 200 53.5
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 1.3e-52 210.7 161 66.5
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 1.7e-52 210.3 201 55.7
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 3.3e-51 206.1 227 50.2
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 2.6e-48 196.4 159 61.0
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 4.7e-42 175.6 158 53.8
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 2.4e-41 173.3 212 47.2
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 2.7e-37 159.8 193 42.5
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 1.1e-35 154.5 203 43.8
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 9.9e-32 141.4 189 39.7
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 2.1e-29 133.7 95 78.9
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 1.5e-27 127.5 92 58.7
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 7.3e-27 125.2 162 46.9
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.3e-26 124.4 134 52.2
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 8.1e-26 121.7 133 46.6
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 2.4e-25 120.2 201 38.8
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.2e-24 117.9 125 60.0
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 2.6e-24 116.7 56 96.4
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 2.1e-18 97.1 71 73.2
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 2.4e-17 93.6 214 31.3
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 5.3e-17 92.4 88 50.0
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 9.0e-17 91.7 183 30.1
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 6.5e-15 85.5 131 38.9
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 1.4e-14 84.3 145 40.7
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 6.7e-12 75.5 72 56.9
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 8.7e-12 75.1 75 57.3
Pp3c13_7410 Physcomitrium patens HOM05D000160 ORTHO05D000496 7.4e-11 72.0 158 31.0
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 4.1e-09 66.2 74 50.0
Pp3c3_5070 Physcomitrium patens HOM05D000160 ORTHO05D000496 1.0e-07 61.6 148 25.7
unitig_747.g21677 Utricularia gibba HOM05D006635 ORTHO05D008047 8.4e-07 58.5 51 49.0
BcaC05g27974 Brassica carinata HOM05D006635 ORTHO05D008047 1.1e-06 58.2 32 78.1


User provided reference genes

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