Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT13G04770
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT13G04770 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | PT13G04770 | 1 | ||
| Tree-based ortholog | PT13G04770 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | N/A | AT5G44040 AT2G33400 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT1G04030 AT5G44040 | 2 | ||
| Tree-based ortholog | 1-to-many | AT5G44040 AT1G04030 AT2G33400 | 3 | ||
| Brachypodium distachyon | Anchor point | N/A | BD1G75840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD5G15470 | 1 | ||
| Tree-based ortholog | 1-to-many | BD1G75840 BD5G15470 | 2 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00306G00050 | 1 | |
| Anchor point | N/A | CP00306G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00306G00050 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00306G00050 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV52888G00010 | 1 | |
| Tree-based ortholog | 1-to-many | HV135605G00010 HV52888G00010 | 2 | ||
| Musa acuminata | Anchor point | N/A | MA11G02630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA08G12990 MA00G26070 MA11G02630 | 3 | ||
| Tree-based ortholog | 1-to-many | MA08G12990 MA11G02630 MA00G26070 | 3 | ||
| Oryza sativa ssp. indica | Anchor point | N/A | OSINDICA_03G03610 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_04G35360 | 1 | ||
| Tree-based ortholog | 1-to-many | OSINDICA_03G03610 OSINDICA_04G35360 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | N/A | OS03G04550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G43230 | 1 | ||
| Tree-based ortholog | 1-to-many | OS03G04550 OS04G43230 | 2 | ||
| Setaria italica | Anchor point | N/A | SI009G56360 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI007G16950 | 1 | ||
| Tree-based ortholog | 1-to-many | SI009G56360 SI007G16950 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G072800 | 1 | |
| Tree-based ortholog | 1-to-1 | SL03G031780 | 1 | ||
| Sorghum bicolor | Anchor point | N/A | SB01G047710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB06G022313 | 1 | ||
| Tree-based ortholog | 1-to-many | SB01G047710 SB03G039700 SB06G022313 | 3 | ||
| Vitis vinifera | Anchor point | N/A | VV14G05270 VV07G11430 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G11430 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV14G05270 | 1 | ||
| Zea mays | Anchor point | N/A | ZM01G02950 ZM09G28240 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G10130 | 1 | ||
| Tree-based ortholog | 1-to-many | ZM09G28240 ZM01G02950 ZM02G10130 | 3 |