Anchorpoints

Gene id
CRU_006G08640
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_007G01940No description available.scaffold_7+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G10090No description available.scaffold_6+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G40070RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G05200.1); Has 9770 Blast hits to 9744 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 2524; Fungi - 782; Plants - 4953; Viruses - 74; Other Eukaryotes - 1437 (source: NCBI BLink).4+View
AT5G10380Encodes a RING finger domain protein with E3 ligase activity that is localized to the lipid rafts of the plasma membrane. Expression is increased in response to fungal pathogen. May be involved in regulation of programmed cell death by facilitating degredation of regulation of PDC activators. RING/U-box superfamily protein RING1; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G23030No description available.A10-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G05270No description available.Bvchr6.sca005+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G18810No description available.Chr1-View
CL02G20650No description available.Chr2+View
CL08G11060No description available.Chr8+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G07610No description available.CM3.5_scaffold00007-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00004G02510No description available.scaffold00004+View
CS00059G00540No description available.scaffold00059-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G38350No description available.scaffold_8-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM02G37296No description available.Gm02+View
GM14G35550No description available.Gm14+View
GM11G37850No description available.Gm11-View
GM18G01791No description available.Gm18-View
GM05G30920No description available.Gm05-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR05G09510No description available.Chr05+View
GR07G23570No description available.Chr07+View
GR12G10320No description available.Chr12+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08265G01330No description available.scaffold08265+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS06G11450zinc finger, C3HC4 type domain containing protein, expressed6-View
OS02G52210zinc finger, C3HC4 type domain containing protein, expressed2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G08370No description available.scaffold_6+View
PPE_006G20110No description available.scaffold_6+View
PPE_001G59040No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G23510No description available.Chr01-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29908G02440No description available.29908+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G074790RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech04+View
SL11G010330RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech11+View
SL04G014220RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech04+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G009370RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr11-View
ST04G029880Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr04-View
ST12G025880Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr12+View
ST04G011280RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G06210No description available.scaffold_8+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G33070similar to AT5G10380|RING1ch6-6-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G41030No description available.5+View
ZM04G27300No description available.4-View


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Gene id
Species
Description
Chromosome
Strand