Functional clusters
Information
- Type
- Mapman term
- Identifier
- 30.11
- Description
- signalling.light
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Citrus sinensis | scaffold00348 | 17 | CH_csi_103 | 5 | 9 | 0.00000299139 |
Eucalyptus grandis | scaffold_2 | 17 | CH_egr_649 | 4 | 5 | 0.0000223507 |
Glycine max | Gm18 | 17 | CH_gma_492 | 5 | 17 | 0.000962821 |
Populus trichocarpa | Chr07 | 17 | CH_ptr_178 | 6 | 9 | 0.0000000299019 |
Populus trichocarpa | Chr08 | 17 | CH_ptr_360 | 4 | 5 | 0.0000881578 |
Prunus persica | scaffold_1 | 17 | CH_ppe_239 | 7 | 21 | 0.00000194969 |
Prunus persica | scaffold_1 | 17 | CH_ppe_139 | 6 | 6 | 0.00000000272894 |
Prunus persica | scaffold_4 | 17 | CH_ppe_303 | 8 | 46 | 0.0000251609 |
Prunus persica | scaffold_8 | 17 | CH_ppe_329 | 4 | 4 | 0.0000603809 |
Prunus persica | scaffold_4 | 18 | CH_ppe_96 | 10 | 88 | 0.0000147928 |
Ricinus communis | 30178 | 17 | CH_rco_260 | 3 | 3 | 0.00060267 |
Solanum lycopersicum | ch02 | 17 | CH_sly_275 | 6 | 21 | 0.0000132875 |
Solanum lycopersicum | ch11 | 17 | CH_sly_264 | 5 | 9 | 0.0000073949 |
Vitis vinifera | chr5 | 17 | CH_vvi_375 | 4 | 7 | 0.000236222 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |