Functional clusters
Information
- Type
- Mapman term
- Identifier
- 26.11.1
- Description
- misc.alcohol dehydrogenases.cinnamyl alcohol dehydrogenase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_1 | 17 | CH_aly_17 | 3 | 3 | 0.00000000597967 |
Arabidopsis thaliana | 1 | 17 | CH_ath_108 | 4 | 6 | 0.000000000332067 |
Brassica rapa | A06 | 17 | CH_bra_74 | 3 | 3 | 0.0000000742279 |
Capsella rubella | scaffold_1 | 17 | CH_cru_97 | 3 | 3 | 0.00000000873841 |
Manihot esculenta | scaffold11106 | 17 | CH_mes_14 | 6 | 10 | 0.00000000000000315548 |
Oryza sativa ssp. japonica | 11 | 17 | CH_osa_376 | 3 | 5 | 0.000292166 |
Oryza sativa ssp. japonica | 2 | 17 | CH_osa_153 | 4 | 5 | 0.000000112639 |
Oryza sativa ssp. japonica | 9 | 17 | CH_osa_49 | 6 | 8 | 0.000000000000348659 |
Vitis vinifera | chr13 | 17 | CH_vvi_145 | 5 | 31 | 0.0000000195947 |
Vitis vinifera | chr13_random | 17 | CH_vvi_320 | 3 | 8 | 0.0000800844 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |