PLAZA 3.0 Dicots : Binding Sites

Binding sites with simlar sequences

Binding site: Matrix_434
Name: ARR11
Description: Not Available

Positional Weight Matrix

Minimum similarity percentage

Binding site	Name	Description	Similarity
Matrix_366	ARR14	Not Available	86.12%
Matrix_408	GATA12	Not Available	80.77%
Matrix_195	GATA2; GATA4	Not Available	80.06%
Matrix_226	GATA1	Not Available	77.61%
Matrix_447	RVE1	Not Available	76.07%
Matrix_392	ARR2	Not Available	75.94%
Matrix_157	LHY; RVE2	Not Available	75.68%
Matrix_286	GATA7	Not Available	75.26%
Matrix_391	AHL20	Not Available	75.23%
Matrix_350	ARR14	Not Available	74.00%
Matrix_502	AT3G13040	Not Available	73.47%
Matrix_505	GATA8	Not Available	72.60%
Matrix_203	GATA9; GATA12	Not Available	72.54%
Matrix_283	GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC	Not Available	71.26%
Matrix_185	AHL25	Not Available	71.20%
Matrix_67	GLK1	Not Available	70.61%
Matrix_327	ARR11	Not Available	70.43%
Matrix_271	AT3G16350	Not Available	70.29%
Matrix_230	ARR11	Not Available	69.98%
Matrix_37	GATA27	Not Available	69.71%
Matrix_276	AT1G01520; AT3G09600; AT4G01280; LCL1; AT5G52660	Not Available	69.22%
Matrix_88	AHL12	Not Available	69.09%
Matrix_182	ATHB6	Not Available	68.50%
Matrix_161	MYBC1; AT3G10760; LUX; AT5G05090; AT5G59570	Not Available	68.16%
Matrix_361	AT1G25550	Not Available	66.62%
Matrix_317	AT1G06070; AT2G31370; AT2G40620	Not Available	65.89%
Matrix_491	AT1G68670; AT3G25790	Not Available	65.73%
Matrix_324	AT2G01060	Not Available	65.65%
Matrix_168	AHL25	Not Available	65.59%
Matrix_336	AT5G08520	Not Available	65.42%
Matrix_418	KNAT6; KNAT2	Not Available	65.39%
Matrix_521	AHL20	Not Available	65.33%
Matrix_16	AT3G04450; PHL1	Not Available	65.09%
Matrix_106	AT5G47390	Not Available	64.47%
Matrix_461	ATHB12	Not Available	64.46%
Matrix_311	TGA1	Not Available	64.33%
Matrix_114	EPR1; AT3G10113	Not Available	64.26%
Matrix_522	GATA11; GATA13	Not Available	64.15%
Matrix_302	HAT1; HAT2	Not Available	64.14%
Matrix_256	IXR11; KNAT5; KNAT4; KNAT3	Not Available	64.05%
Matrix_22	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	63.91%
Matrix_76	GATA10	Not Available	63.86%
Matrix_69	AT2G03500	Not Available	63.85%
Matrix_210	ARR1	Not Available	63.79%
Matrix_4	ARR14	Not Available	63.55%
Matrix_143	GATA14; GATA6; GATA5	Not Available	63.10%
Matrix_512	HAT3	Not Available	63.04%
Matrix_160	RVE1	Not Available	63.01%
Matrix_308	INO	Not Available	62.62%
Matrix_162	AtPHR1	Not Available	62.56%
Matrix_56	BZIP17; BZIP28; BZIP49	Not Available	62.51%
Matrix_383	CCA1	Not Available	62.38%
Matrix_351	HAT9; ATHB-4; ATHB2; HAT22; HAT14	Not Available	62.26%
Matrix_463	HAT3.1	Not Available	62.18%
Matrix_93	YAB5	Not Available	62.14%
Matrix_71	ATHB7	Not Available	61.99%
Matrix_508	APL; AT3G12730; AT3G24120; UNE16	Not Available	61.97%
Motif_561	GATA-2; GATA-4; GATA-3; GATA-1	Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics	61.92%
Matrix_6	AT1G70000	Not Available	61.69%
Matrix_333	GATA3	Not Available	61.52%
Matrix_181	Dof5.7	Not Available	61.48%
Matrix_63	ARR10	Not Available	61.36%
Matrix_489	RAV1	Not Available	61.35%
Matrix_72	CDF2	Not Available	61.34%
Matrix_128	TGA2	Not Available	61.16%
Matrix_354	AHL12	Not Available	61.09%
Matrix_328	AT1G76580	Not Available	61.02%
Matrix_212	ATHB-12	Not Available	60.71%
Matrix_236	CCA1	Not Available	60.70%
Matrix_32	AHL25	Not Available	60.51%
Matrix_75	WRKY29	Not Available	60.46%
Matrix_471	KAN4	Not Available	60.40%
Matrix_125	AHL12	Not Available	60.30%
Matrix_227	AT1G64620	Not Available	60.23%
Matrix_518	AT2G21230	Not Available	60.23%
Matrix_425	TIFY2A	Not Available	60.19%
Matrix_423	AT3G04030	Not Available	60.15%
Matrix_17	WRKY22	Not Available	60.15%
Matrix_404	OBP4	Not Available	60.11%
Matrix_241	HB-1; AT5G44180	Not Available	60.03%
Matrix_268	EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105	Not Available	59.91%
Matrix_109	GBF3	Not Available	59.89%
Matrix_89	SOC1	Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis	59.86%
Matrix_231	HDG2; HDG3; ATML1; HB-7	Not Available	59.80%
Matrix_504	WRKY40	Not Available	59.66%
Matrix_432	AT1G77920	Not Available	59.34%
Matrix_259	AT1G50680; AT1G51120	Not Available	59.33%
Matrix_97	APRR2	Not Available	59.32%
Matrix_70	GATA26	Not Available	59.29%
Matrix_12	EIN3; EIL2	Not Available	59.24%
Matrix_501	DAG2	Not Available	59.20%
Matrix_255	cdf3	Not Available	59.02%
Matrix_435	ATHB51	Not Available	58.99%
Matrix_444	AT1G19485; AT4G17950	Not Available	58.98%
Matrix_312	ARF11; MP; ARF6; IAA21; ARF8; ARF4	Not Available	58.91%
Matrix_384	ATWRKY17	Not Available	58.89%
Matrix_204	WOX13	Not Available	58.73%
Matrix_218	TIFY2B; TIFY1	Not Available	58.63%
Matrix_152	EIL1; AT5G65100	Not Available	58.60%
Matrix_166	TGA4	Not Available	58.59%
Matrix_263	WRKY33; WRKY19; WRKY32	Not Available	58.59%
Matrix_206	CUC1; ANAC100	Not Available	58.54%
Matrix_431	ATHB21; HB-3	Not Available	58.38%
Matrix_313	ATMYB65; MYB33	Not Available	58.35%
Matrix_103	ATHB1	The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities	58.09%
Motif_464	ARR1; ARR2	Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators	58.03%
Matrix_207	WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49	Not Available	57.70%
Matrix_54	AHL20	Not Available	57.66%
Matrix_53	MYC3	Not Available	57.63%
Matrix_201	AT1G74840	Not Available	57.41%
Motif_345	GT-1	Molecular dissection of GT-1 from Arabidopsis	57.40%
Matrix_46	AT4G21895	Not Available	57.40%
Matrix_3	WRKY48	Not Available	57.36%
Matrix_483	ICU4	Not Available	57.25%
Matrix_416	ASL5	Not Available	57.13%
Matrix_167	ZAT6	Not Available	57.07%
Matrix_347	WOX14; WOX10	Not Available	56.98%
Matrix_370	WRKY50; WRKY51	Not Available	56.98%
Matrix_331	GBF1	Not Available	56.98%
Matrix_494	OBP4	Not Available	56.97%
Matrix_141	AT3G25990	Not Available	56.92%
Matrix_99	DOF4.7	Not Available	56.86%
Matrix_284	KAN2; KAN3; KAN; KAN4	Not Available	56.82%
Matrix_80	BIM1	Not Available	56.82%
Motif_408	EVENINGAT	Evening element found 46 times in the promoters of 31 cycling genes in Arabidopsis thaliana; Required for circadian control of gene expression; EE (evening element) motif; Also found in the promoter of the Solanum melongena gene encoding cysteine protease, and identified as cis-element for its circadian regulation;Orchestrated transcription of key pathways in Arabidopsis by the circadian clock	56.80%
Matrix_87	AT1G19000	Not Available	56.51%
Matrix_246	ARR10	Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators	56.35%
Matrix_101	ERF5	Not Available	56.33%
Matrix_8	KAN1	Not Available	56.25%
Matrix_419	TGA9; PAN; TGA6; bZIP65	Not Available	56.20%
Matrix_453	EIL3	Not Available	55.86%
Matrix_429	KAN4	Not Available	55.84%
Matrix_265	NGA3	Not Available	55.84%
Matrix_193	RAV1	Not Available	55.84%
Matrix_441	ATHB5	Not Available	55.83%
Matrix_254	MYB52	Not Available	55.66%
Matrix_279	HRS1	Not Available	55.64%
Matrix_430	TOE2	Not Available	55.63%
Matrix_274	EDF3	Not Available	55.52%
Matrix_38	SPL14	Not Available	55.35%
Matrix_62	HAT5	Not Available	55.28%
Matrix_520	ARR14	Not Available	55.26%
Matrix_410	TOE2	Not Available	55.15%
Matrix_380	ATMYR1	Not Available	55.14%
Matrix_296	GBF2	Not Available	55.03%
Matrix_126	RBE	Not Available	54.98%
Matrix_51	LFY	Not Available	54.96%
Matrix_322	NST3; ANAC015; BRN2	Not Available	54.92%
Matrix_59	AT4G00238; AT4G00250	Not Available	54.92%
Matrix_81	YAB1	Not Available	54.86%
Matrix_151	ASIL1	Not Available	54.82%
Matrix_507	TCP3	Not Available	54.79%
Motif_637	SARD1; CBP60g	Control of salicylic acid synthesis and systemic acquired resistance by two members of a plant-specific family of transcription factors	54.77%
Matrix_442	AT5G62260	Not Available	54.75%
Matrix_421	GLK1	Not Available	54.67%
Motif_43	CCA1 binding site motif	CCA1 binding site; CCA1 protein (myb-related transcription factor) interact with two imperfect repeats of AAMAATCT in Lhcb1*3 gene of Arabidopsis thaliana; Related to regulation by phytochrome;A myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene	54.56%
Matrix_171	LBD3; LBD4	Not Available	54.51%
Matrix_303	ATWOX13	Not Available	54.41%
Matrix_85	SPL5	Not Available	54.35%
Matrix_21	HSFC1	Not Available	54.30%
Matrix_402	TOE1	Not Available	54.28%
Matrix_113	ABI5	Not Available	54.24%
Matrix_523	FUSCA3	Not Available	54.24%
Matrix_300	bZIP68; bZIP16	Not Available	54.23%
Matrix_205	AGL15	Not Available	54.19%
Matrix_287	ERF2	Not Available	54.15%
Matrix_318	ATHB16	Not Available	54.08%
Matrix_131	HDG12; EDT1; GL2; HDG8	Not Available	54.03%
Matrix_78	AT3G45610	Not Available	53.97%
Matrix_479	TOE1	Not Available	53.95%
Motif_582	ARR1; ARR2	Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators	53.88%
Matrix_280	TCP24; TCP1; BRC2; ATTCP18	Not Available	53.86%
Matrix_198	STZ; C2H2; AZF3	Not Available	53.85%
Matrix_248	ZFP5	Not Available	53.82%
Matrix_379	RHL41	Not Available	53.81%
Matrix_515	ddf2; ATCBF3; CBF1; CBF4	Not Available	53.68%
Matrix_84	AtGRF6	Not Available	53.68%
Matrix_102	WRKY21	Not Available	53.65%
Motif_424	GATA-1	Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics	53.56%
Matrix_164	AT1G02030; AT2G45120; AZF2; AT3G60580	Not Available	53.55%
Matrix_175	Dof5.7	Not Available	53.52%
Matrix_139	OBF5	Not Available	53.50%
Matrix_415	WRKY27	Not Available	53.31%
Matrix_503	AT2G37430; AT3G53600	Not Available	53.25%
Matrix_481	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	53.22%
Matrix_424	MYB59	Not Available	53.20%
Matrix_239	AT5G04390	Not Available	53.13%
Matrix_397	GT2L	Not Available	53.01%
Matrix_178	HSFB2A	Not Available	53.00%
Matrix_341	HMGA	Not Available	52.88%
Matrix_26	ATMYB3; MYB24	Not Available	52.87%
Matrix_519	ATDOF2.4	Not Available	52.80%
Motif_347	OPAQUE2ZMB32	opaque-2 binding site of maize b-32 (type I ribosome-inactivating protein gene); O2; O2S; O2S and GARE form a gibberellin response complex (GARC)	52.73%
Matrix_44	CUC3; anac046; NAC3; ANAC087; ATNAC6; CUC2	Not Available	52.69%
Motif_624	ATHB6 binding site motif	Consensus binding sequence for Arabidopsis homeodomain-leucine zipper protein, ATHB6; ATHB6 is a target of the protein phosphatase ABI1 and regulates hormone responses; Homeodomain protein ATHB6 is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis	52.68%
Matrix_436	AT3G49930; AZF1	Not Available	52.54%
Matrix_41	anac058	Not Available	52.47%
Matrix_122	ABF1; AREB2	Not Available	52.28%
Matrix_199	AT1G69170; SPL9; SPL15; SPL13A; SPL13B	Not Available	52.27%
Matrix_165	KNAT1	Not Available	52.25%
Matrix_177	ADOF2	Not Available	52.20%
Matrix_188	SPL4	Not Available	51.99%
Matrix_142	ZFP8	Not Available	51.89%
Motif_34	LECPLEACS2	Core element in LeCp (tomato Cys protease) binding cis-element (from -715 to -675) in LeAcs2 gene	51.72%
Matrix_14	ZCW32; AT5G62610	Not Available	51.68%
Matrix_9	AT5G04760	Not Available	51.67%
Matrix_258	WOX13	Not Available	51.48%
Matrix_58	WRKY55; ATWRKY54; WRKY46; WRKY70; AtWRKY41; WRKY53; WRKY30	Not Available	51.44%
Matrix_427	ZAT14	Not Available	51.34%
Matrix_399	TGA1	Not Available	51.32%
Matrix_243	RAP2.12; RAP2.2	Not Available	51.31%
Matrix_315	MYB111	Not Available	51.30%
Motif_235	C8GCARGAT	Binding site of plant MADS-domain protein AGL15; CArG motif with a longer A/T-rich core;A variant of CArG motif, with a longer A/T-rich core; Binding site for AGL15 (AGAMOUS-like 15)	51.30%
Motif_677	AGL22; AGL20; AGL24	Regulation of floral patterning by flowering time genes	51.28%
Matrix_220	WRKY18	Not Available	51.28%
Motif_83	CIACADIANLELHC	Region necessary for circadian expression of tomato Lhc gene	51.24%
Matrix_412	GL1	Not Available	51.23%
Matrix_197	NAP	Not Available	51.16%
Matrix_411	DOF5.6	Not Available	51.11%
Motif_580	L1BOXATPDF1	L1 box found in promoter of Arabidopsis thaliana PROTODERMAL FACTOR1 (PDF1) gene; Located between -134 and -127; Involved in L1 layer-specific expression; L1-specific homeodomain protein ATML can bind to the L1 box; Y=C/T; A cotton fiber gene, RD22-like 1 (RDL1), contains a homeodomain binding L1 box and a MYB binding motif ; HDZip IV; Identification of a cis-regulatory element for L1 layer-specific gene expression, which is targeted by an L1-specific homeodomain protein	51.03%
Motif_540	CCA1 motif1 BS in CAB1	A myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene	51.00%
Matrix_319	TEM1	Not Available	50.95%
Matrix_52	ZAT18	Not Available	50.57%
Matrix_202	WRKY71; WRKY28; WRKY8	Not Available	50.52%
Matrix_40	TCP2	Not Available	50.37%
Motif_475	GATA-1	Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics	50.31%
Matrix_420	ANAC58	Not Available	50.29%
Matrix_25	AP3	Not Available	50.20%
Matrix_406	ATERF-7	Not Available	50.14%
Matrix_368	ATWRKY56; WRKY45; WRKY75; WRKY24	Not Available	50.10%
Motif_131	P1BS	PHR1-binding sequence found in the upstream regions of phosphate starvation responsive genes from several plant species; phr1 (phosphate starvation response 1) gene codes for PHR1 protein related to PSR1 gene in C. reinhardtii	50.04%