Binding site page : Motif_43


Identifier
Motif_43
Name
CCA1 binding site motif
Description
CCA1 binding site; CCA1 protein (myb-related transcription factor) interact with two imperfect repeats of AAMAATCT in Lhcb1*3 gene of Arabidopsis thaliana; Related to regulation by phytochrome;A myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene
Number of genes
2381
Sequence
AAMAATCT
Positional Weight Matrix

Binding site distribution per species

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Binding site distribition per location

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Associated Transcription Factors

Transcription factor Alias Description Orthologs Associated motifs
AT2G46830circadian clock associated 1P92973;AtCCA1View orthologsView associated binding sites

Gene List

Index of genes with 1 constraints:

Page 1 of 120, showing 20 records out of 2381 total, starting on record 1, ending on 20

gene_id species strand chr type
GM01G13900 gma + Gm01 coding
GM01G32116 gma - Gm01 coding
GM01G41440 gma - Gm01 coding
GM01G43450 gma - Gm01 coding
GM01G43946 gma - Gm01 coding
GM02G09090 gma + Gm02 coding
GM02G17181 gma - Gm02 coding
GM02G25230 gma - Gm02 coding
GM02G34726 gma + Gm02 coding
GM03G29330 gma + Gm03 coding
GM03G40330 gma - Gm03 coding
GM04G09020 gma - Gm04 coding
GM04G12510 gma + Gm04 coding
GM04G33950 gma - Gm04 coding
GM05G25810 gma + Gm05 coding
GM05G28800 gma - Gm05 coding
GM05G35840 gma - Gm05 coding
GM05G36620 gma - Gm05 coding
GM06G07000 gma - Gm06 coding
GM06G08530 gma - Gm06 coding

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