Binding site page : Motif_580
- Identifier
- Motif_580
- Name
- L1BOXATPDF1
- Description
- L1 box found in promoter of Arabidopsis thaliana PROTODERMAL FACTOR1 (PDF1) gene; Located between -134 and -127; Involved in L1 layer-specific expression; L1-specific homeodomain protein ATML can bind to the L1 box; Y=C/T; A cotton fiber gene, RD22-like 1 (RDL1), contains a homeodomain binding L1 box and a MYB binding motif ; HDZip IV; Identification of a cis-regulatory element for L1 layer-specific gene expression, which is targeted by an L1-specific homeodomain protein
- Number of genes
- 1754
- Associated publications
- Sequence
- TAAATGYA
- Positional Weight Matrix
Binding site distribution per species
Binding site distribition per location
Toolbox
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- ... associated Gene Ontology annotation of this binding site.
- ... associated InterPro annotation of this binding site.
- ... associated MapMan annotation of this binding site.
Gene List
Index of genes with 1 constraints:
- Binding site : Motif_580
Page 1 of 88, showing 20 records out of 1754 total, starting on record 1, ending on 20
gene_id | species | strand | chr | type |
---|---|---|---|---|
GM00G00830 | gma | + | scaffold_41 | coding |
GM01G04460 | gma | - | Gm01 | coding |
GM01G38980 | gma | - | Gm01 | coding |
GM02G08250 | gma | - | Gm02 | coding |
GM02G34070 | gma | - | Gm02 | coding |
GM02G36600 | gma | + | Gm02 | coding |
GM02G40520 | gma | - | Gm02 | coding |
GM02G40726 | gma | + | Gm02 | coding |
GM02G42180 | gma | + | Gm02 | coding |
GM02G45690 | gma | + | Gm02 | coding |
GM02G46060 | gma | - | Gm02 | coding |
GM03G03360 | gma | - | Gm03 | coding |
GM04G00670 | gma | - | Gm04 | coding |
GM04G00930 | gma | + | Gm04 | coding |
GM04G01651 | gma | + | Gm04 | coding |
GM04G05140 | gma | + | Gm04 | coding |
GM04G14320 | gma | + | Gm04 | coding |
GM04G15520 | gma | + | Gm04 | coding |
GM04G36500 | gma | - | Gm04 | coding |
GM04G43480 | gma | + | Gm04 | coding |