Integrative Orthology Viewer: AT3G16830 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G15750 AT1G80490 AT3G15880 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | AT3G16830 | 1 | ||
Tree-based ortholog | AT3G16830 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00003G01090 ATR_00048G01130 ATR_00051G00290 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00048G01130 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00003G01090 | 1 | ||
Cycas micholitzii | Orthologous gene family | many-to-many | CMI00007404 CMI00028842 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CMI00028842 | 1 | ||
Tree-based ortholog | 1-to-many | CMI00020146 CMI00007408 CMI00008335 ... | 10 | ||
Ginkgo biloba | Orthologous gene family | many-to-1 | GBI00027603 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GBI00027603 | 1 | ||
Tree-based ortholog | 1-to-many | GBI00008404 GBI00012286 GBI00013788 ... | 8 | ||
Gnetum montanum | Orthologous gene family | many-to-many | GMO00009190 GMO00031497 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GMO00000752 | 1 | ||
Tree-based ortholog | 1-to-many | GMO00009191 GMO00028948 GMO00017705 ... | 5 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G15020 OS03G14980 OS08G06480 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G15020 | 1 | ||
Tree-based ortholog | 1-to-1 | OS01G15020 | 1 | ||
Picea abies | Orthologous gene family | many-to-many | PAB00009574 PAB00013590 PAB00016166 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PAB00016166 | 1 | ||
Tree-based ortholog | 1-to-many | PAB00038946 PAB00019932 PAB00027095 ... | 8 | ||
Picea glauca | Orthologous gene family | many-to-many | PGL00008318 PGL00012904 PGL00018870 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PGL00020420 | 1 | ||
Tree-based ortholog | 1-to-many | PGL00003694 PGL00008318 PGL00024912 ... | 10 | ||
Pseudotsuga menziesii | Orthologous gene family | many-to-many | PME00000963 PME00011221 PME00011222 ... | 30 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PME00021781 | 1 | ||
Tree-based ortholog | 1-to-many | PME00061116 PME00143383 PME00080374 ... | 43 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00099G00800 PP00316G00160 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00316G00160 | 1 | ||
Tree-based ortholog | 1-to-many | PP00099G00800 PP00316G00160 | 2 | ||
Pinus pinaster | Orthologous gene family | many-to-many | PPI00009009 PPI00011265 PPI00014687 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPI00011265 | 1 | ||
Tree-based ortholog | 1-to-many | PPI00069797 PPI00005789 PPI00064363 ... | 24 | ||
Picea sitchensis | Orthologous gene family | many-to-1 | PSI00018526 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PSI00019216 | 1 | ||
Tree-based ortholog | 1-to-many | PSI00013859 PSI00019895 PSI00004404 ... | 7 | ||
Pinus sylvestris | Orthologous gene family | many-to-many | PSY00008885 PSY00010048 PSY00015499 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PSY00015515 | 1 | ||
Tree-based ortholog | 1-to-many | PSY00019975 PSY00006227 PSY00012676 ... | 13 | ||
Pinus taeda | Orthologous gene family | many-to-many | PTA00007149 PTA00011031 PTA00017004 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PTA00011031 | 1 | ||
Tree-based ortholog | 1-to-many | PTA00029050 PTA00069633 PTA00080934 ... | 70 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G20050 PT03G03000 PT05G02170 ... | 10 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT13G01210 | 1 | ||
Tree-based ortholog | 1-to-many | PT05G02170 PT13G01210 | 2 | ||
Taxus baccata | Orthologous gene family | many-to-many | TBA00002615 TBA00004128 TBA00007615 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TBA00007615 | 1 | ||
Tree-based ortholog | 1-to-many | TBA00017326 TBA00007998 TBA00026192 ... | 4 |