Physcomitrella patens

Physcomitrella patens has, like most mosses, a much simpler morphology then vascular plants, therefore this is an excellent model for studying developmental & physiological processes. It's genome is a great asset in comparative genomics as it can be used as an outgroup for the Angiosperms.

Publication:
Rensing, S.A. et al. The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science 319, 64-9 (2008).

Info and Links

Source JGI assembly release v1.1 and COSMOSS annotation v1.6
PLAZA identifier ppa
NCBI link Physcomitrella patens
Mitochondrion AB251495
Chloroplast AP005672

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Annotations


Page 1 of 1624, showing 20 records out of 32472 total, starting on record 1, ending on 20

Gene Transcript Start Stop Strand Chr Type Gene family
PP00001G00010 PP00001G00010.1 7841 8333 - scaffold_1 coding singleton
PP00001G00020 PP00001G00020.1 23035 23220 - scaffold_1 coding singleton
PP00001G00030 PP00001G00030.1 24956 25552 - scaffold_1 coding HOM03D000139
PP00001G00040 PP00001G00040.1 81181 82647 - scaffold_1 coding HOM03D000185
PP00001G00050 PP00001G00050.1 101835 103054 - scaffold_1 coding HOM03D000139
PP00001G00060 PP00001G00060.1 186516 187082 - scaffold_1 coding HOM03D000017
PP00001G00070 PP00001G00070.1 188516 188689 - scaffold_1 coding singleton
PP00001G00080 PP00001G00080.1 196421 196624 - scaffold_1 coding singleton
PP00001G00090 PP00001G00090.1 201378 205343 - scaffold_1 coding HOM03D004653
PP00001G00100 PP00001G00100.1 206159 206990 - scaffold_1 coding HOM03D004653
PP00001G00110 PP00001G00110.1 268370 272786 + scaffold_1 coding HOM03D004002
PP00001G00120 PP00001G00120.1 277854 279986 + scaffold_1 coding HOM03D007015
PP00001G00130 PP00001G00130.1 302076 308711 - scaffold_1 coding HOM03D000039
PP00001G00140 PP00001G00140.1 316123 317365 - scaffold_1 coding HOM03D013930
PP00001G00150 PP00001G00150.1 318534 318725 - scaffold_1 coding singleton
PP00001G00160 PP00001G00160.1 354632 356082 - scaffold_1 coding HOM03D000882
PP00001G00170 PP00001G00170.1 393154 396079 + scaffold_1 coding HOM03D007014
PP00001G00180 PP00001G00180.1 398120 399320 + scaffold_1 coding singleton
PP00001G00190 PP00001G00190.1 400372 400735 + scaffold_1 coding singleton
PP00001G00200 PP00001G00200.1 401119 404303 + scaffold_1 coding HOM03D003947