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WorkbenchArabidopsis thaliana
Arabidopsis thaliana, or the mouse-ear cress, is to plant sciences, what mouse is to animal biology. It has all features to make it a perfect model organism and has, despite several recent genome duplications, a very small genome. Additionally several techniques to manipulate these plants and their genome made it the perfect candidate to be the first plant to have it's genome sequenced.
Publication:
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408, 796-815 (2000)
Info and Links
| Source | TAIR10 |
| PLAZA identifier | ath |
| NCBI link | Arabidopsis thaliana |
| Mitochondrion | Y08501 | Chloroplast | AP000423 |
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Annotations
Page 1 of 1681, showing 20 records out of 33602 total, starting on record 1, ending on 20
| Gene | Transcript | Start | Stop | Strand | Chr | Type | Gene family |
|---|---|---|---|---|---|---|---|
| AT1G01010 | AT1G01010.1 | 3760 | 5630 | + | 1 | coding | HOM03D000029 |
| AT1G01020 | AT1G01020.1 | 6915 | 8666 | - | 1 | coding | HOM03D006181 |
| AT1G01030 | AT1G01030.1 | 11864 | 12940 | - | 1 | coding | HOM03D000340 |
| AT1G01040 | AT1G01040.2 | 23519 | 31079 | + | 1 | coding | HOM03D000216 |
| AT1G01046 | AT1G01046.1 | 28500 | 28706 | + | 1 | rna | |
| AT1G01050 | AT1G01050.1 | 31382 | 32670 | - | 1 | coding | HOM03D001204 |
| AT1G01060 | AT1G01060.1 | 33992 | 37061 | - | 1 | coding | HOM03D001075 |
| AT1G01070 | AT1G01070.1 | 38898 | 40877 | - | 1 | coding | HOM03D000065 |
| AT1G01073 | AT1G01073.1 | 44677 | 44787 | + | 1 | coding | singleton |
| AT1G01080 | AT1G01080.2 | 45503 | 46789 | - | 1 | coding | HOM03D001527 |
| AT1G01090 | AT1G01090.1 | 47705 | 49166 | - | 1 | coding | HOM03D000787 |
| AT1G01100 | AT1G01100.1 | 50284 | 50954 | - | 1 | coding | HOM03D001391 |
| AT1G01110 | AT1G01110.2 | 52239 | 54494 | + | 1 | coding | HOM03D000194 |
| AT1G01115 | AT1G01115.1 | 56624 | 56740 | + | 1 | coding | singleton |
| AT1G01120 | AT1G01120.1 | 57392 | 58978 | - | 1 | coding | HOM03D000138 |
| AT1G01130 | AT1G01130.1 | 61905 | 63811 | - | 1 | coding | HOM03D016776 |
| AT1G01140 | AT1G01140.3 | 64398 | 67512 | - | 1 | coding | HOM03D000025 |
| AT1G01150 | AT1G01150.1 | 70115 | 71998 | - | 1 | coding | HOM03D004410 |
| AT1G01160 | AT1G01160.2 | 72583 | 73883 | + | 1 | coding | HOM03D002054 |
| AT1G01170 | AT1G01170.1 | 74105 | 74443 | - | 1 | coding | HOM03D005950 |