At5g60120.1 68412.m06823 AP2 domain transcription factor, putative
Matching miRNAs:
| miRNA name | IGR name | mature miRNA sequence | Targets | Rfam | |
|---|---|---|---|---|---|
| 1 | prec16075 | igr4897#chr5#x1=23595489#l=2752_1161+1267 | GTGGGAATCTTGATGATGCTGCATC | 3 | |
| 2 | prec19372 | igr922#chr3#x1=3597929#l=5132_1870-1970 | ATGAGAATCTTGATGATGCTGCA | 4 | |
| 3 | prec6903 | igr280#chr5#x1=1185020#l=7141_3192-3282 | GAATCTTGATGATGCTGCATC | 2 | ath-MIR172a2 |
Gene Sequence:
ggcgauagcu auuuugucuc uucaaauccc cauagaccaa uacucaacuc uucaucucca 60 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 ugucuccuca aucucauuuc ucuccuuagu gauugagcuu uuuccuucuu ucucuuuggu 120 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 uauuauuccu ucuccuccuc cgucguguuu uugauugauu ucagaaucua aaucuccguu 180 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 ugauuucucc auacucgugc ugauuuucac cuauguaaug ugauuuauga gcucuguuua 240 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 uuucaaaucg acggcgaucg uugaauuuau ugaucaaugu guaaguaaga gcuugaagaa 300 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 auaguuuuug uuguuguugu gaaagcucag aguuuuguuu gcuuuuuugu ugacuuuuuu 360 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 gagauugAUG CUGGAUCUCA AUCUCGACGU CGACUCGACC GAGUCUACUC AGAACGAACG 420 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 AGAUUCGAUU ACUGUUAAAG GGGUUUCUUU GAAUCAGAUG GAUGAAUCGG UGACGUCGAA 480 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 CUCUUCUGUU GUUAAUGCUG AAGCUUCUAG CUGUAUAGAU GGUGAAGAUG AGUUGUGCUC 540 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 UACACGAACG GUCAAGUUUC AAUUUGAGAU ACUGAAAGGA GGAGGAGAAG AAGAAGAAGA 600 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 AGAUGAUGAU GAAAGAAGUG CUGUGAUGAU GACUAAGGAG UUUUUUCCUG UUGCUAAAGG 660 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 CAUGAACUUU AUGGAUUCGA GCGCUCAAAG UUCAAGGAGC ACCGUUGAUA UUUCCUUCCA 720 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 GAGGGGGAAA CAAGGUGGAG ACUUUAUAGG UAGCGGGAGC GGUGGUGGCG AUGCUUCACG 780 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 GGUGAUGCAG CCACCAUCAC AGCCGGUGAA GAAAAGCAGG AGAGGUCCUA GGUCUAAGAG 840 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 UUCUCAGUAU AGAGGCGUCA CUUUCUAUCG GAGGACAGGC AGAUGGGAAU CGCAUAUCUG 900 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 GGAUUGCGGU AAACAAGUUU AUUUAGGUGG AUUUGAUACU GCCCAUGCUG CAGCUAGGGC 960 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 GUAUGAUCGA GCUGCUGUCA AAUUCCGGGG UCUGGAAGCU GACAUCAAUU UCGUUAUUGG 1020 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 CGAUUAUGAA GAGGAUCUCA AGCAGAUGGC GAAUCUUUCC AAAGAGGAAG UUGUGCAAGU 1080 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 ACUUCGGCGA CAGAGCUCUG GUUUCUCAAG GAAUAAUUCU AGAUAUCAAG GAGUUGCUUU 1140 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 GCAAAAGAUU GGCGGGUGGG GAGCUCAAAU GGAGCAGCUU CAUGGAAACA UGGGUUGUGA 1200 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 CAAGGCAGCC GUACAAUGGA AGGGAAGGGA AGCUGCUUCC UUAAUUGAGC CUCAUGCAUC 1260 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 CCGAAUGAUU CCCGAGGCAG CUAAUGUUAA GCUCGACCUC AACUUGGGAA UCUCUCUUUC 1320 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 ACUAGGAGAU GGUCCGAAGC AAAAAGAUAG GGCCCUCCGG CUUCACCAUG UCCCUAACAA 1380 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 UUCCGUAUGU GGAAGGAACA CCAUGAUGGA GAACCACAUG GCUGCAGCGG CAUGUGAUAC 1440 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 GCCUUUCAAU UUCUUGAAGA GGGGUUCAGA CCAUCUUAAU AACCGGCAUG CCCUUCCUUC 1500 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 UGCGUUCUUU UCACCCAUGG AAAGAACACC AGAGAAAGGG CUUAUGUUAC GUUCUCAUCA 1560 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 AAGCUUCCCA GCCAGGACAU GGCAAGGGCA UGAUCAGUCC AGUGGUGGGA CCGCCGUAGC 1620 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 AGCUACAGCA CCGCCACUGU UUUCAAAUGC AGCAUCAUCA GGAUUCUCAC UCUCAGCUAC 1680 .......... .......... .....***** ********** ********** .......... prec16075 .......... .......... .......*** ********** ********** .......... prec19372 .......... .......... .....***** ********** ******.... .......... prec6903 ACGCCCUCCU UCAUCCACAG CUAUUCAUCA UCCUUCUCAG CCCUUCGUCA AUCUGAAUCA 1740 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 GCCCGGUCUC UAUGUUAUCC ACCCAUCUGA UUACAUAUCU CAGCACCAAC ACAAUCUCAU 1800 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 GAACCGCCCA CAACCACCAC CAUAGcuucc uccuuccucc gcauaacuca agguucuaca 1860 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 cagcccugag guuggaauaa guuggaaggc cagccaaaac gacgcugaau ucucccaaga 1920 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 ucuguuguac uuauugucau ugugugauuu aucuuucugc uuuugauuug uaacauaaac 1980 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 ugagggauaa uaccaaaaca gaacccaaac ccauuugcca uuuuacuaua augucucuga 2040 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 uauuaauaug aacagcguaa aguacaaugc auucuauaug uaugaaugaa gaaagcuauu 2100 .......... .......... .......... .......... .......... .......... prec16075 .......... .......... .......... .......... .......... .......... prec19372 .......... .......... .......... .......... .......... .......... prec6903 gagacuugag agacu 2115 .......... ..... prec16075 .......... ..... prec19372 .......... ..... prec6903