Binding site page : Motif_227


Identifier
Motif_227
Name
WRKY43;WRKY38;WRKY26
Description
Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense;Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function
Number of genes
83
Associated publications
1, 2
Sequence
ATTTGACCAA
Positional Weight Matrix

Binding site distribution per species

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Binding site distribition per location

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Associated Transcription Factors

Transcription factor Alias Description Orthologs Associated motifs
AT5G07100WRKY DNA-binding protein 26Q9C5T3;WRKY26View orthologsView associated binding sites
AT2G46130WRKY DNA-binding protein 43WRKY43;Q8GY11View orthologsView associated binding sites
AT5G22570WRKY DNA-binding protein 38WRKY DNA-binding protein 38;Q8GWF1View orthologsView associated binding sites

Gene List

Index of genes with 1 constraints:

Page 1 of 5, showing 20 records out of 83 total, starting on record 1, ending on 20

gene_id species strand chr type
GM13G19380 gma - Gm13 coding
GM15G13710 gma + Gm15 coding
GM15G16320 gma + Gm15 coding
GM02G39380 gma + Gm02 coding
GM06G02890 gma - Gm06 coding
GM14G37516 gma + Gm14 coding
GM08G27155 gma + Gm08 coding
GM18G50371 gma + Gm18 coding
GM19G03786 gma + Gm19 coding
GM08G42540 gma - Gm08 coding
GM13G41310 gma - Gm13 coding
PPE_003G21460 ppe - scaffold_3 coding
PPE_004G08640 ppe + scaffold_4 coding
PPE_006G03830 ppe - scaffold_6 coding
PPE_008G02570 ppe + scaffold_8 coding
PPE_002G17200 ppe - scaffold_2 coding
PPE_001G46800 ppe + scaffold_1 coding
PPE_001G43940 ppe - scaffold_1 coding
PPE_006G11690 ppe - scaffold_6 coding
PPE_007G15740 ppe + scaffold_7 coding

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