PLAZA 3.0 Dicots : Binding Sites

InterPro domains associated with a binding site

Binding site: Motif_227
Name: WRKY43;WRKY38;WRKY26
Description: Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense;Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function

#Associated genes: 83
#Associated InterPro terms: 101

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InterPro	Description	#Associated genes	ath	bra	cme	egr	gma	ptr	ppe	sly	stu	vvi
IPR015655	Protein phosphatase 2C	6 (7.23%)	1	1	0	0	0	2	1	0	1	0
IPR001932	Protein phosphatase 2C (PP2C)-like domain	6 (7.23%)	1	1	0	0	0	2	1	0	1	0
IPR009057	Homeodomain-like	5 (6.02%)	0	0	0	0	0	3	0	1	1	0
IPR027949	Petal formation-expressed	4 (4.82%)	1	0	0	3	0	0	0	0	0	0
IPR025110	AMP-binding enzyme C-terminal domain	3 (3.61%)	0	0	1	0	1	0	1	0	0	0
IPR020845	AMP-binding, conserved site	3 (3.61%)	0	0	1	0	1	0	1	0	0	0
IPR000873	AMP-dependent synthetase/ligase	3 (3.61%)	0	0	1	0	1	0	1	0	0	0
IPR011989	Armadillo-like helical	3 (3.61%)	0	0	0	1	0	0	1	0	0	1
IPR016024	Armadillo-type fold	3 (3.61%)	0	0	0	1	0	0	1	0	0	1
IPR008972	Cupredoxin	3 (3.61%)	1	0	0	0	1	0	0	0	1	0
IPR003657	DNA-binding WRKY	3 (3.61%)	0	1	0	0	0	0	0	1	1	0
IPR006712	HD-ZIP protein, N-terminal	3 (3.61%)	0	0	0	0	0	1	0	1	1	0
IPR001356	Homeobox domain	3 (3.61%)	0	0	0	0	0	1	0	1	1	0
IPR017970	Homeobox, conserved site	3 (3.61%)	0	0	0	0	0	1	0	1	1	0
IPR003106	Leucine zipper, homeobox-associated	3 (3.61%)	0	0	0	0	0	1	0	1	1	0
IPR001117	Multicopper oxidase, type 1	3 (3.61%)	1	0	0	0	1	0	0	0	1	0
IPR011706	Multicopper oxidase, type 2	3 (3.61%)	1	0	0	0	1	0	0	0	1	0
IPR002182	NB-ARC	3 (3.61%)	1	1	0	0	0	0	1	0	0	0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	3 (3.61%)	1	1	0	0	0	0	1	0	0	0
IPR000719	Protein kinase domain	3 (3.61%)	0	0	0	0	1	2	0	0	0	0
IPR017441	Protein kinase, ATP binding site	3 (3.61%)	0	0	0	0	1	2	0	0	0	0
IPR011009	Protein kinase-like domain	3 (3.61%)	0	0	0	0	1	2	0	0	0	0
IPR008271	Serine/threonine-protein kinase, active site	3 (3.61%)	0	0	0	0	1	2	0	0	0	0
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	3 (3.61%)	1	1	0	0	0	0	1	0	0	0
IPR017887	Transcription factor TCP subgroup	3 (3.61%)	0	0	0	0	3	0	0	0	0	0
IPR005333	Transcription factor, TCP	3 (3.61%)	0	0	0	0	3	0	0	0	0	0
IPR011004	Trimeric LpxA-like	3 (3.61%)	1	0	1	0	0	0	0	0	0	1
IPR003593	AAA+ ATPase domain	2 (2.41%)	1	0	0	0	0	0	1	0	0	0
IPR001471	AP2/ERF domain	2 (2.41%)	1	0	0	0	0	0	1	0	0	0
IPR013785	Aldolase-type TIM barrel	2 (2.41%)	0	0	0	0	0	0	0	1	1	0
IPR001451	Bacterial transferase hexapeptide repeat	2 (2.41%)	1	0	1	0	0	0	0	0	0	0
IPR004282	Chloroplast envelope membrane protein, CemA	2 (2.41%)	0	0	0	0	0	0	0	1	1	0
IPR016177	DNA-binding domain	2 (2.41%)	1	0	0	0	0	0	1	0	0	0
IPR015202	Domain of unknown function DUF1929	2 (2.41%)	0	0	0	0	1	1	0	0	0	0
IPR015916	Galactose oxidase, beta-propeller	2 (2.41%)	0	0	0	0	1	1	0	0	0	0
IPR011043	Galactose oxidase/kelch, beta-propeller	2 (2.41%)	0	0	0	0	1	1	0	0	0	0
IPR008979	Galactose-binding domain-like	2 (2.41%)	0	0	0	1	0	1	0	0	0	0
IPR009880	Glyoxal oxidase, N-terminal	2 (2.41%)	0	0	0	0	1	1	0	0	0	0
IPR000047	Helix-turn-helix motif	2 (2.41%)	0	0	0	0	0	0	0	1	1	0
IPR018357	Hexapeptide transferase, conserved site	2 (2.41%)	1	0	1	0	0	0	0	0	0	0
IPR027167	Hydroxymethylglutaryl-CoA lyase	2 (2.41%)	0	0	0	0	0	0	0	1	1	0
IPR000138	Hydroxymethylglutaryl-CoA lyase, active site	2 (2.41%)	0	0	0	0	0	0	0	1	1	0
IPR014756	Immunoglobulin E-set	2 (2.41%)	0	0	0	0	1	1	0	0	0	0
IPR013783	Immunoglobulin-like fold	2 (2.41%)	0	0	0	0	1	1	0	0	0	0
IPR004087	K Homology domain	2 (2.41%)	1	0	0	0	0	0	0	0	0	1
IPR004088	K Homology domain, type 1	2 (2.41%)	1	0	0	0	0	0	0	0	0	1
IPR002355	Multicopper oxidase, copper-binding site	2 (2.41%)	0	0	0	0	1	0	0	0	1	0
IPR011707	Multicopper oxidase, type 3	2 (2.41%)	1	0	0	0	0	0	0	0	1	0
IPR017930	Myb domain	2 (2.41%)	0	0	0	0	0	2	0	0	0	0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	2 (2.41%)	0	0	0	0	0	0	0	1	1	0
IPR003441	NAC domain	2 (2.41%)	0	0	0	0	0	0	0	1	0	1
IPR012677	Nucleotide-binding, alpha-beta plait	2 (2.41%)	0	0	0	0	0	0	0	0	1	1
IPR001086	Prephenate dehydratase	2 (2.41%)	0	0	1	0	0	0	1	0	0	0
IPR018528	Prephenate dehydratase, conserved site	2 (2.41%)	0	0	1	0	0	0	1	0	0	0
IPR006946	Protein of unknown function DUF642	2 (2.41%)	0	0	0	1	0	1	0	0	0	0
IPR000891	Pyruvate carboxyltransferase	2 (2.41%)	0	0	0	0	0	0	0	1	1	0
IPR002677	Ribosomal protein L32p	2 (2.41%)	0	0	0	0	0	0	0	1	1	0
IPR001005	SANT/Myb domain	2 (2.41%)	0	0	0	0	0	2	0	0	0	0
IPR005881	Serine O-acetyltransferase	2 (2.41%)	1	0	1	0	0	0	0	0	0	0
IPR010493	Serine acetyltransferase, N-terminal	2 (2.41%)	1	0	1	0	0	0	0	0	0	0
IPR002290	Serine/threonine- / dual specificity protein kinase, catalytic domain	2 (2.41%)	0	0	0	0	0	2	0	0	0	0
IPR013083	Zinc finger, RING/FYVE/PHD-type	2 (2.41%)	0	0	0	0	0	0	2	0	0	0
IPR006948	Allinase, C-terminal	1 (1.20%)	0	0	0	0	0	0	1	0	0	0
IPR001164	Arf GTPase activating protein	1 (1.20%)	0	0	0	0	1	0	0	0	0	0
IPR004827	Basic-leucine zipper domain	1 (1.20%)	0	0	0	0	0	0	1	0	0	0
IPR000095	CRIB domain	1 (1.20%)	0	0	0	0	0	1	0	0	0	0
IPR013320	Concanavalin A-like lectin/glucanase, subgroup	1 (1.20%)	0	0	0	0	1	0	0	0	0	0
IPR018247	EF-Hand 1, calcium-binding site	1 (1.20%)	0	0	0	0	0	1	0	0	0	0
IPR002048	EF-hand domain	1 (1.20%)	0	0	0	0	0	1	0	0	0	0
IPR011992	EF-hand domain pair	1 (1.20%)	0	0	0	0	0	1	0	0	0	0
IPR006947	EGF-like, alliinase	1 (1.20%)	0	0	0	0	0	0	1	0	0	0
IPR004263	Exostosin-like	1 (1.20%)	0	0	0	0	0	0	0	0	1	0
IPR001810	F-box domain	1 (1.20%)	0	0	0	0	0	0	0	1	0	0
IPR025715	Friend of PRMT1 duplication	1 (1.20%)	0	0	0	0	0	0	0	0	1	0
IPR002902	Gnk2-homologous domain	1 (1.20%)	0	0	0	0	0	0	1	0	0	0
IPR023282	Hydroxymethylglutaryl-CoA reductase, N-terminal	1 (1.20%)	1	0	0	0	0	0	0	0	0	0
IPR002202	Hydroxymethylglutaryl-CoA reductase, class I/II	1 (1.20%)	1	0	0	0	0	0	0	0	0	0
IPR009023	Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding	1 (1.20%)	1	0	0	0	0	0	0	0	0	0
IPR023074	Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain	1 (1.20%)	1	0	0	0	0	0	0	0	0	0
IPR023076	Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site	1 (1.20%)	1	0	0	0	0	0	0	0	0	0
IPR009029	Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding	1 (1.20%)	1	0	0	0	0	0	0	0	0	0
IPR004554	Hydroxymethylglutaryl-CoA reductase, eukaryotic/arcaheal type	1 (1.20%)	1	0	0	0	0	0	0	0	0	0
IPR017761	Laccase	1 (1.20%)	0	0	0	0	0	0	0	0	1	0
IPR025875	Leucine rich repeat 4	1 (1.20%)	0	0	0	0	0	0	0	0	1	0
IPR001611	Leucine-rich repeat	1 (1.20%)	0	0	0	0	0	0	0	0	1	0
IPR003591	Leucine-rich repeat, typical subtype	1 (1.20%)	0	0	0	0	0	0	0	0	1	0
IPR013210	Leucine-rich repeat-containing N-terminal, type 2	1 (1.20%)	0	0	0	0	0	0	0	0	1	0
IPR002885	Pentatricopeptide repeat	1 (1.20%)	0	0	0	0	0	0	0	1	0	0
IPR014782	Peptidase M1, membrane alanine aminopeptidase, N-terminal	1 (1.20%)	0	0	0	0	0	0	0	0	0	1
IPR003359	Photosystem I Ycf4, assembly	1 (1.20%)	0	0	0	0	0	0	0	1	0	0
IPR009438	Phytosulfokine	1 (1.20%)	0	1	0	0	0	0	0	0	0	0
IPR021850	Protein of unknown function DUF3453	1 (1.20%)	0	0	0	1	0	0	0	0	0	0
IPR015424	Pyridoxal phosphate-dependent transferase	1 (1.20%)	0	0	0	0	0	0	1	0	0	0
IPR015421	Pyridoxal phosphate-dependent transferase, major region, subdomain 1	1 (1.20%)	0	0	0	0	0	0	1	0	0	0
IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2	1 (1.20%)	0	0	0	0	0	0	1	0	0	0
IPR007201	RNA recognition motif 2	1 (1.20%)	0	0	0	0	0	0	0	0	0	1
IPR000504	RNA recognition motif domain	1 (1.20%)	0	0	0	0	0	0	0	0	1	0
IPR011990	Tetratricopeptide-like helical	1 (1.20%)	0	0	0	0	0	0	0	1	0	0
IPR003613	U box domain	1 (1.20%)	0	0	0	0	0	0	1	0	0	0
IPR001841	Zinc finger, RING-type	1 (1.20%)	0	0	0	0	0	0	1	0	0	0
IPR011332	Zinc-binding ribosomal protein	1 (1.20%)	0	0	0	0	0	0	0	0	1	0