Matrix_520 | ARR14 | Not Available | | 77.37% |
Matrix_143 | GATA14; GATA6; GATA5 | Not Available | | 74.33% |
Matrix_505 | GATA8 | Not Available | | 72.14% |
Matrix_276 | AT1G01520; AT3G09600; AT4G01280; LCL1; AT5G52660 | Not Available | | 71.69% |
Matrix_333 | GATA3 | Not Available | | 70.42% |
Matrix_70 | GATA26 | Not Available | | 69.42% |
Matrix_37 | GATA27 | Not Available | | 69.25% |
Matrix_203 | GATA9; GATA12 | Not Available | | 68.90% |
Matrix_284 | KAN2; KAN3; KAN; KAN4 | Not Available | | 68.40% |
Matrix_421 | GLK1 | Not Available | | 68.39% |
Matrix_160 | RVE1 | Not Available | | 67.60% |
Matrix_444 | AT1G19485; AT4G17950 | Not Available | | 67.23% |
Matrix_383 | CCA1 | Not Available | | 67.01% |
Matrix_199 | AT1G69170; SPL9; SPL15; SPL13A; SPL13B | Not Available | | 66.27% |
Matrix_328 | AT1G76580 | Not Available | | 66.16% |
Matrix_327 | ARR11 | Not Available | | 65.95% |
Matrix_8 | KAN1 | Not Available | | 65.56% |
Matrix_85 | SPL5 | Not Available | | 64.86% |
Matrix_157 | LHY; RVE2 | Not Available | | 64.44% |
Matrix_415 | WRKY27 | Not Available | | 63.94% |
Matrix_152 | EIL1; AT5G65100 | Not Available | | 63.54% |
Matrix_218 | TIFY2B; TIFY1 | Not Available | | 62.84% |
Matrix_231 | HDG2; HDG3; ATML1; HB-7 | Not Available | | 62.57% |
Matrix_508 | APL; AT3G12730; AT3G24120; UNE16 | Not Available | | 62.53% |
Matrix_97 | APRR2 | Not Available | | 62.44% |
Matrix_17 | WRKY22 | Not Available | | 62.38% |
Matrix_512 | HAT3 | Not Available | | 62.25% |
Matrix_197 | NAP | Not Available | | 61.88% |
Matrix_137 | SPL1; SPL12 | Not Available | | 61.82% |
Matrix_75 | WRKY29 | Not Available | | 61.82% |
Matrix_125 | AHL12 | Not Available | | 61.54% |
Matrix_259 | AT1G50680; AT1G51120 | Not Available | | 61.50% |
Matrix_500 | WRKY43 | Not Available | | 61.25% |
Matrix_202 | WRKY71; WRKY28; WRKY8 | Not Available | | 61.13% |
Matrix_195 | GATA2; GATA4 | Not Available | | 60.86% |
Matrix_114 | EPR1; AT3G10113 | Not Available | | 60.76% |
Matrix_391 | AHL20 | Not Available | | 60.71% |
Matrix_434 | ARR11 | Not Available | | 60.70% |
Matrix_263 | WRKY33; WRKY19; WRKY32 | Not Available | | 60.54% |
Matrix_87 | AT1G19000 | Not Available | | 60.43% |
Matrix_408 | GATA12 | Not Available | | 60.38% |
Matrix_227 | AT1G64620 | Not Available | | 60.32% |
Matrix_491 | AT1G68670; AT3G25790 | Not Available | | 60.21% |
Matrix_502 | AT3G13040 | Not Available | | 59.94% |
Matrix_67 | GLK1 | Not Available | | 59.91% |
Matrix_141 | AT3G25990 | Not Available | | 59.86% |
Matrix_72 | CDF2 | Not Available | | 59.71% |
Matrix_3 | WRKY48 | Not Available | | 59.69% |
Matrix_162 | AtPHR1 | Not Available | | 59.67% |
Matrix_504 | WRKY40 | Not Available | | 59.50% |
Motif_345 | GT-1 | Molecular dissection of GT-1 from Arabidopsis | | 59.43% |
Matrix_69 | AT2G03500 | Not Available | | 59.41% |
Matrix_425 | TIFY2A | Not Available | | 59.30% |
Matrix_249 | WRKY11 | Not Available | | 59.25% |
Matrix_522 | GATA11; GATA13 | Not Available | | 59.23% |
Matrix_181 | Dof5.7 | Not Available | | 59.20% |
Matrix_384 | ATWRKY17 | Not Available | | 59.15% |
Matrix_81 | YAB1 | Not Available | | 58.96% |
Matrix_416 | ASL5 | Not Available | | 58.91% |
Matrix_453 | EIL3 | Not Available | | 58.86% |
Matrix_46 | AT4G21895 | Not Available | | 58.82% |
Matrix_226 | GATA1 | Not Available | | 58.65% |
Matrix_120 | BEE2 | Not Available | | 58.65% |
Matrix_370 | WRKY50; WRKY51 | Not Available | | 58.64% |
Matrix_53 | MYC3 | Not Available | | 58.61% |
Matrix_129 | ABF1 | Not Available | | 58.59% |
Matrix_182 | ATHB6 | Not Available | | 58.53% |
Matrix_76 | GATA10 | Not Available | | 58.49% |
Matrix_93 | YAB5 | Not Available | | 58.34% |
Matrix_88 | AHL12 | Not Available | | 58.26% |
Matrix_412 | GL1 | Not Available | | 58.15% |
Matrix_316 | WRKY15; WRKY39; WRKY7; WRKY74 | Not Available | | 58.10% |
Matrix_255 | cdf3 | Not Available | | 58.04% |
Matrix_16 | AT3G04450; PHL1 | Not Available | | 58.00% |
Matrix_32 | AHL25 | Not Available | | 57.72% |
Motif_408 | EVENINGAT | Evening element found 46 times in the promoters of 31 cycling genes in Arabidopsis thaliana; Required for circadian control of gene expression; EE (evening element) motif; Also found in the promoter of the Solanum melongena gene encoding cysteine protease, and identified as cis-element for its circadian regulation;Orchestrated transcription of key pathways in Arabidopsis by the circadian clock | | 57.71% |
Matrix_314 | WRKY65; WRKY14; WRKY35; WRKY69; WRKY16; ATWRKY52 | Not Available | | 57.65% |
Matrix_336 | AT5G08520 | Not Available | | 57.58% |
Matrix_38 | SPL14 | Not Available | | 57.48% |
Matrix_268 | EMB2749; VND5; SMB; VND1; ANAC076; NAC101; ANAC105 | Not Available | | 57.46% |
Matrix_465 | MYC4 | Not Available | | 57.42% |
Matrix_9 | AT5G04760 | Not Available | | 57.36% |
Matrix_322 | NST3; ANAC015; BRN2 | Not Available | | 57.27% |
Motif_153 | MARABOX1 | A-box found in SAR(scaffold attachment region; or matrix attachment region, MAR) | | 57.23% |
Matrix_347 | WOX14; WOX10 | Not Available | | 57.21% |
Matrix_429 | KAN4 | Not Available | | 57.20% |
Matrix_210 | ARR1 | Not Available | | 57.19% |
Matrix_308 | INO | Not Available | | 57.18% |
Matrix_351 | HAT9; ATHB-4; ATHB2; HAT22; HAT14 | Not Available | | 57.06% |
Matrix_207 | WRKY10; WRKY57; AT2G44745; ATWRKY13; WRKY49 | Not Available | | 57.00% |
Motif_660 | GT-3b | Pathogen- and NaCl-induced expression of the SCaM-4 promoter is mediated in part by a GT-1 box that interacts with a GT-1-like transcription factor | | 56.85% |
Matrix_4 | ARR14 | Not Available | | 56.75% |
Motif_556 | INTRONUPPER | 5' exon-intron splice junctions of plant introns; Plant intron upper sequence; Consensus sequence for plant introns | | 56.68% |
Matrix_330 | MYC2; TT8 | Not Available | | 56.54% |
Matrix_494 | OBP4 | Not Available | | 56.44% |
Matrix_116 | ANAC55 | Not Available | | 56.34% |
Matrix_204 | WOX13 | Not Available | | 56.33% |
Matrix_326 | AT5G07310; Rap2.6L; AT5G61890 | Not Available | | 56.30% |
Matrix_442 | AT5G62260 | Not Available | | 56.21% |
Matrix_324 | AT2G01060 | Not Available | | 56.16% |
Matrix_366 | ARR14 | Not Available | | 56.10% |
Matrix_302 | HAT1; HAT2 | Not Available | | 56.08% |
Matrix_447 | RVE1 | Not Available | | 56.04% |
Matrix_435 | ATHB51 | Not Available | | 55.99% |
Matrix_361 | AT1G25550 | Not Available | | 55.95% |
Matrix_389 | ILR3 | Not Available | | 55.92% |
Matrix_212 | ATHB-12 | Not Available | | 55.83% |
Matrix_283 | GATA15; GATA17; AT4G16141; GATA22; GATA23; GATA16; GNC | Not Available | | 55.80% |
Matrix_286 | GATA7 | Not Available | | 55.77% |
Matrix_501 | DAG2 | Not Available | | 55.73% |
Matrix_185 | AHL25 | Not Available | | 55.65% |
Matrix_472 | ZN_C2_H2 | Not Available | | 55.63% |
Motif_309 | GATA promoter motif | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 55.59% |
Matrix_423 | AT3G04030 | Not Available | | 55.54% |
Matrix_303 | ATWOX13 | Not Available | | 55.34% |
Matrix_355 | ERF10; ERF11 | Not Available | | 55.27% |
Matrix_323 | BIM3 | Not Available | | 55.22% |
Matrix_449 | BIM2 | Not Available | | 55.11% |
Matrix_99 | DOF4.7 | Not Available | | 54.92% |
Matrix_279 | HRS1 | Not Available | | 54.85% |
Matrix_66 | AtLEC2 | Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis | | 54.84% |
Matrix_200 | PIL5; AT4G28790; AT4G28800; AT4G28811; AT4G28815 | Not Available | | 54.84% |
Matrix_411 | DOF5.6 | Not Available | | 54.79% |
Motif_297 | Bellringer/replumless/pennywise BS1 IN AG | Repression of AGAMOUS by BELLRINGER in Floral and Inflorescence Meristems | | 54.74% |
Matrix_354 | AHL12 | Not Available | | 54.69% |
Motif_131 | P1BS | PHR1-binding sequence found in the upstream regions of phosphate starvation responsive genes from several plant species; phr1 (phosphate starvation response 1) gene codes for PHR1 protein related to PSR1 gene in C. reinhardtii | | 54.61% |
Matrix_54 | AHL20 | Not Available | | 54.61% |
Matrix_296 | GBF2 | Not Available | | 54.37% |
Matrix_102 | WRKY21 | Not Available | | 54.37% |
Matrix_450 | SPL7 | Not Available | | 54.33% |
Matrix_158 | AT1G03040; LRL1; UNE12; LRL2; LRL3 | Not Available | | 54.32% |
Motif_181 | IBOXCORENT | I-box core motif in the CAMs (conserved DNA modular arrays) associated with light-responsive promoter regions | | 54.29% |
Matrix_237 | MYB55 | Not Available | | 54.28% |
Matrix_177 | ADOF2 | Not Available | | 54.18% |
Matrix_142 | ZFP8 | Not Available | | 54.18% |
Matrix_282 | bZIP60 | Not Available | | 54.17% |
Matrix_420 | ANAC58 | Not Available | | 54.13% |
Matrix_175 | Dof5.7 | Not Available | | 54.13% |
Matrix_273 | ANAC55 | Not Available | | 54.08% |
Motif_523 | GATA-2; GATA-4; GATA-3; GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 54.08% |
Matrix_59 | AT4G00238; AT4G00250 | Not Available | | 54.02% |
Motif_579 | WRECSAA01 | Wound-responsive element (WRE) found in the promoter region of cucumber ascorbate oxidase gene, CsAAO1; Binding site of proteins in tobacco nuclear extracts | | 53.99% |
Matrix_441 | ATHB5 | Not Available | | 53.94% |
Matrix_461 | ATHB12 | Not Available | | 53.84% |
Matrix_171 | LBD3; LBD4 | Not Available | | 53.83% |
Matrix_350 | ARR14 | Not Available | | 53.81% |
Motif_93 | RGATAOS | R-GATA (GATA motif binding factor) binding site; GATA motif is found at -143 to -135 of RTBV promoter; GATA motif is required for phloem-specific gene expression of Rice Tungro Bacilliform Virus (RTBV); See also RNFG1OS, RNFG2OS, and ABFOS | | 53.72% |
Matrix_151 | ASIL1 | Not Available | | 53.65% |
Matrix_221 | SPL7 | Not Available | | 53.62% |
Matrix_489 | RAV1 | Not Available | | 53.57% |
Matrix_307 | RGL2; RGL3 | Not Available | | 53.57% |
Motif_642 | SEF1MOTIF | SEF1 (soybean embryo factor 1) binding motif; sequence found in 5'-upstream region (-640; -765) of soybean beta-conglicinin (7S globulin) gene | | 53.43% |
Motif_293 | NONAMERATH4 | Nonamer motif of Arabidopsis thaliana histone H4 promoter;Identification of cis-elements regulating the expression of an Arabidopsis histone H4 gene | | 53.42% |
Matrix_254 | MYB52 | Not Available | | 53.41% |
Matrix_337 | MYB46 | Not Available | | 53.40% |
Matrix_89 | SOC1 | Genome-wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis | | 53.32% |
Matrix_230 | ARR11 | Not Available | | 53.32% |
Matrix_341 | HMGA | Not Available | | 53.29% |
Matrix_220 | WRKY18 | Not Available | | 53.29% |
Matrix_393 | REM1 | Not Available | | 53.26% |
Motif_475 | GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 53.22% |
Matrix_71 | ATHB7 | Not Available | | 53.22% |
Matrix_431 | ATHB21; HB-3 | Not Available | | 53.19% |
Matrix_241 | HB-1; AT5G44180 | Not Available | | 53.16% |
Matrix_228 | TGA2 | Not Available | | 53.04% |
Matrix_262 | ATGRP2B; CSDP2 | Not Available | | 53.02% |
Matrix_165 | KNAT1 | Not Available | | 53.01% |
Matrix_382 | AT3G04850 | Not Available | | 52.99% |
Matrix_243 | RAP2.12; RAP2.2 | Not Available | | 52.97% |
Matrix_174 | ZAT2 | Not Available | | 52.94% |
Motif_561 | GATA-2; GATA-4; GATA-3; GATA-1 | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | | 52.93% |
Motif_580 | L1BOXATPDF1 | L1 box found in promoter of Arabidopsis thaliana PROTODERMAL FACTOR1 (PDF1) gene; Located between -134 and -127; Involved in L1 layer-specific expression; L1-specific homeodomain protein ATML can bind to the L1 box; Y=C/T; A cotton fiber gene, RD22-like 1 (RDL1), contains a homeodomain binding L1 box and a MYB binding motif ; HDZip IV; Identification of a cis-regulatory element for L1 layer-specific gene expression, which is targeted by an L1-specific homeodomain protein | | 52.89% |
Matrix_300 | bZIP68; bZIP16 | Not Available | | 52.88% |
Matrix_188 | SPL4 | Not Available | | 52.85% |
Matrix_78 | AT3G45610 | Not Available | | 52.84% |
Matrix_463 | HAT3.1 | Not Available | | 52.81% |
Motif_222 | AGMOTIFNTMYB2 | AG-motif found at -114 of the promoter of NtMyb2 gene; NtMyb2 is a regulator of the tobacco retrotransposon Tto1 and the defence-related gene phenylalanine ammonia lyase (PAL), which are induced by various stress such as wounding or elicitor treatment; AGP1 (GATA-type zinc finger protein) binding site | | 52.66% |
Matrix_136 | SEP3 | Not Available | | 52.66% |
Matrix_62 | HAT5 | Not Available | | 52.61% |
Motif_673 | Bellringer/replumless/pennywise BS2 IN AG | Repression of AGAMOUS by BELLRINGER in Floral and Inflorescence Meristems | | 52.57% |
Matrix_368 | ATWRKY56; WRKY45; WRKY75; WRKY24 | Not Available | | 52.56% |
Matrix_51 | LFY | Not Available | | 52.49% |
Matrix_168 | AHL25 | Not Available | | 52.38% |
Motif_138 | RAP2.2 | Transcription factor RAP2.2 and its interacting partner SINAT2: stable elements in the carotenogenesis of Arabidopsis leaves | | 52.37% |
Matrix_521 | AHL20 | Not Available | | 52.21% |
Matrix_208 | AP1 | Not Available | | 52.13% |
Matrix_12 | EIN3; EIL2 | Not Available | | 52.10% |
Motif_468 | WRKY43; WRKY38; WRKY26 | Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function | | 52.09% |
Matrix_519 | ATDOF2.4 | Not Available | | 52.05% |
Matrix_23 | ANAC46 | Not Available | | 51.96% |
Matrix_258 | WOX13 | Not Available | | 51.82% |
Matrix_256 | IXR11; KNAT5; KNAT4; KNAT3 | Not Available | | 51.78% |
Matrix_148 | WRKY60 | Not Available | | 51.51% |
Matrix_325 | WRKY4; WRKY3; WRKY58; ATWRKY34; WRKY20; ATWRKY2 | Not Available | | 51.48% |
Matrix_84 | AtGRF6 | Not Available | | 51.39% |
Matrix_131 | HDG12; EDT1; GL2; HDG8 | Not Available | | 51.37% |
Matrix_277 | RAP2.6 | Not Available | | 51.36% |
Matrix_180 | SPL1 | Not Available | | 51.34% |
Matrix_515 | ddf2; ATCBF3; CBF1; CBF4 | Not Available | | 51.33% |
Motif_248 | L1-box | Arabidopsis DELLA and two HD-ZIP transcription factors regulate GA signaling in the epidermis through the L1 box cis-element | | 51.30% |
Matrix_523 | FUSCA3 | Not Available | | 51.24% |
Matrix_332 | SPT; ALC | Not Available | | 51.19% |
Matrix_427 | ZAT14 | Not Available | | 51.09% |
Matrix_260 | CAMTA3 | Not Available | | 51.08% |
Matrix_493 | AT1G22985; AT1G71130 | Not Available | | 51.03% |
Matrix_470 | WRKY18 | Not Available | | 51.01% |
Matrix_40 | TCP2 | Not Available | | 50.97% |
Motif_341 | NAM | Molecular characterization of AtNAM: a member of the Arabidopsis NAC domain superfamily | | 50.95% |
Matrix_52 | ZAT18 | Not Available | | 50.94% |
Matrix_274 | EDF3 | Not Available | | 50.92% |
Motif_257 | BOX1PSGS2 | Box 1 element in pea glutamine synthetase (GS2) gene; An element in a 33-bp AT-rich sequence (box 1) of the 5' end of a GS2 promoter; Located at -837 to -827 of pea GS2; Multimer of box 1 element was used to isolate a cDNA encoding an AT-rich DNA binding protein (ATBP-1) | | 50.92% |
Matrix_135 | ABI3 | Not Available | | 50.82% |
Motif_19 | AAGACGTAGATACL12 | Sequence found in Arabidopsis acyl carrier protein (ACP), Acl1.2, gene promoter; Contains bZIP core motif (ACGT) | | 50.80% |
Matrix_169 | E2F1 | Not Available | | 50.75% |
Matrix_20 | ANAC030; NST1; NAC066 | Not Available | | 50.73% |
Matrix_357 | WRKY61; WRKY6; WRKY9; WRKY36; WRKY47; WRKY42; WRKY31; WRKY72 | Not Available | | 50.73% |
Matrix_205 | AGL15 | Not Available | | 50.71% |
Matrix_50 | ATERF14; AT5G43410 | Not Available | | 50.68% |
Matrix_280 | TCP24; TCP1; BRC2; ATTCP18 | Not Available | | 50.57% |
Matrix_418 | KNAT6; KNAT2 | Not Available | | 50.54% |
Matrix_201 | AT1G74840 | Not Available | | 50.48% |
Matrix_374 | AT5G07580; AT5G61590 | Not Available | | 50.45% |
Matrix_103 | ATHB1 | The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities | | 50.23% |
Matrix_91 | CRF3 | Not Available | | 50.23% |
Matrix_317 | AT1G06070; AT2G31370; AT2G40620 | Not Available | | 50.22% |
Matrix_315 | MYB111 | Not Available | | 50.21% |
Matrix_397 | GT2L | Not Available | | 50.18% |
Matrix_312 | ARF11; MP; ARF6; IAA21; ARF8; ARF4 | Not Available | | 50.09% |
Motif_166 | RAP2.2 | Transcription factor RAP2.2 and its interacting partner SINAT2: stable elements in the carotenogenesis of Arabidopsis leaves | | 50.07% |
Matrix_299 | PFG3 | Not Available | | 50.05% |
Matrix_167 | ZAT6 | Not Available | | 50.04% |
Matrix_25 | AP3 | Not Available | | 50.03% |
Matrix_285 | DDF1 | Not Available | | 50.00% |
Motif_123 | GT-1 | Molecular dissection of GT-1 from Arabidopsis | | 50.00% |