Binding site page : Motif_468


Identifier
Motif_468
Name
WRKY43;WRKY38;WRKY26
Description
Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function
Number of genes
30
Associated publications
1, 2
Sequence
AGATGACCAA
Positional Weight Matrix

Binding site distribution per species

Upstream data    Downstream data    Intron data    All data

Binding site distribition per location

Toolbox

Explore

View

 

Associated Transcription Factors

Transcription factor Alias Description Orthologs Associated motifs
AT5G07100WRKY DNA-binding protein 26Q9C5T3;WRKY26View orthologsView associated binding sites
AT2G46130WRKY DNA-binding protein 43WRKY43;Q8GY11View orthologsView associated binding sites
AT5G22570WRKY DNA-binding protein 38WRKY DNA-binding protein 38;Q8GWF1View orthologsView associated binding sites

Gene List

Index of genes with 1 constraints:

Page 1 of 2, showing 20 records out of 30 total, starting on record 1, ending on 20

gene_id species strand chr type
GM01G26940 gma + Gm01 coding
GM03G15030 gma - Gm03 coding
GM09G35980 gma - Gm09 coding
PPE_008G18310 ppe + scaffold_8 coding
PPE_007G11670 ppe - scaffold_7 coding
PPE_001G25630 ppe - scaffold_1 coding
PPE_006G23480 ppe - scaffold_6 coding
AT2G45740 ath + 2 coding
AT3G55720 ath + 3 coding
AT3G61070 ath - 3 coding
AT5G16190 ath - 5 coding
BR04G03790 bra - A04 coding
BR05G05220 bra + A05 coding
BR09G36530 bra + A09 coding
EG0002G09020 egr + scaffold_2 coding
EG0011G29950 egr + scaffold_11 coding
EG0010G09840 egr - scaffold_10 coding
EG0002G17500 egr + scaffold_2 coding
VV03G04750 vvi + chr3 coding
VV04G04170 vvi + chr4 coding

Download genes (select columns to include)

gene_id
species
strand
chr
type