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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
gene11141
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
gene11141
Fragilariopsis cylindrus
2.9e-112
406.0
209
100.0
ps00G05920
Pseudo-nitzschia multiseries
9.2e-95
347.8
201
87.6
fso155640
Fistulifera solaris
7.6e-73
275.0
202
60.4
sya00G162130
Synedra acus
2.1e-67
256.9
207
57.0
tps146910
Thalassiosira pseudonana
2.4e-66
253.4
202
56.9
CC00G86210
Cyclotella cryptica
9.0e-66
251.5
202
56.9
tho87860
Thalassiosira oceanica
7.2e-47
188.7
169
60.9
fso150310
Fistulifera solaris
7.4e-44
178.7
145
54.5
Ec-26_004520
Ectocarpus siliculosus
9.1e-42
171.8
210
45.2
gsu76240
Galdieria sulphuraria
7.7e-41
168.7
197
45.2
ccr161060
Chondrus crispus
4.7e-38
159.5
200
42.5
Cre05.g248550
Chlamydomonas reinhardtii
2.3e-37
157.1
197
45.2
AT1G18910
Arabidopsis thaliana
8.8e-37
155.2
195
42.6
Pp3c25_14501
Physcomitrella patens
1.1e-36
154.8
197
48.7
Pp3c25_14500
Physcomitrella patens
1.1e-36
154.8
197
48.7
AT1G74770
Arabidopsis thaliana
4.4e-36
152.9
195
36.9
ccr36960
Chondrus crispus
4.4e-36
152.9
208
41.8
Pp3c6_1960
Physcomitrella patens
1.3e-35
151.4
195
47.7
AT3G18290
Arabidopsis thaliana
2.8e-35
150.2
197
35.5
Naga_100090g9
Nannochloropsis gaditana
3.7e-35
149.8
213
41.3
CM13G01410
Cyanidioschyzon merolae
7.7e-33
142.1
203
43.3
ccr65580
Chondrus crispus
8.5e-32
138.7
205
35.6
FBgn0031816
Drosophila melanogaster
8.0e-30
132.1
194
31.4
ENSG00000163743
Homo sapiens
5.7e-28
125.9
198
32.3
AT3G62970
Arabidopsis thaliana
1.3e-27
124.8
196
44.9
SPAC2F3.16
Schizosaccharomyces pombe
2.8e-27
123.6
205
36.1
AT5G22920
Arabidopsis thaliana
8.2e-27
122.1
186
44.1
Cre17.g718300
Chlamydomonas reinhardtii
8.2e-27
122.1
197
44.7
AT5G18650
Arabidopsis thaliana
4.5e-25
116.3
193
43.0
Pp3c11_6970
Physcomitrella patens
4.5e-25
116.3
182
44.0
fso77080
Fistulifera solaris
1.5e-23
111.3
197
29.9
ptri130290
Phaeodactylum tricornutum
1.5e-23
111.3
197
29.9
Pp3c2_31820
Physcomitrella patens
2.5e-23
110.5
182
44.0
Pp3c10_4820
Physcomitrella patens
3.2e-23
110.2
192
41.1
Pp3c1_6070
Physcomitrella patens
1.2e-22
108.2
182
42.9
ps00G33510
Pseudo-nitzschia multiseries
2.7e-22
107.1
196
29.1
sya00G161050
Synedra acus
3.6e-22
106.7
196
30.1
fso199510
Fistulifera solaris
1.8e-21
104.4
182
36.3
gene16313
Fragilariopsis cylindrus
5.2e-21
102.8
196
28.6
fso73640
Fistulifera solaris
1.2e-20
101.7
182
37.4
fso160310
Fistulifera solaris
3.4e-20
100.1
197
29.4
Pp3c14_5600
Physcomitrella patens
3.4e-20
100.1
183
43.7
Sro99_g050950
Seminavis robusta
3.4e-20
100.1
196
27.0
fso77050
Fistulifera solaris
5.7e-20
99.4
199
32.7
fso191720
Fistulifera solaris
7.5e-20
99.0
199
32.7
Sro968_g226070
Seminavis robusta
9.8e-20
98.6
196
26.5
tps130000
Thalassiosira pseudonana
3.1e-18
93.6
198
27.8
tps193950
Thalassiosira pseudonana
7.0e-18
92.4
174
35.6
pte443830
Paramecium tetraurelia
1.6e-17
91.3
195
41.0
Sro695_g188680
Seminavis robusta
1.6e-17
91.3
174
35.6
CC00G149660
Cyclotella cryptica
2.0e-17
90.9
174
34.5
tho217020
Thalassiosira oceanica
2.0e-17
90.9
174
33.3
tps142420
Thalassiosira pseudonana
7.7e-17
89.0
174
33.3
CC00G122160
Cyclotella cryptica
1.0e-16
88.6
186
34.4
sya00G00440
Synedra acus
6.5e-16
85.9
122
32.8
pte243060
Paramecium tetraurelia
1.1e-15
85.1
199
38.7
pte760660
Paramecium tetraurelia
4.0e-13
76.6
200
37.5
AT5G25560
Arabidopsis thaliana
5.2e-13
76.3
139
45.3
Sro345_g122370
Seminavis robusta
1.4e-10
68.2
47
55.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (4 genes)
Synedra acus (3 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing