Gene: gene11141 (Fragilariopsis cylindrus)

Overview top

Gene Identifier
gene11141
Transcript Identifier
268226
Gene Type
Coding gene
Location
scaffold_3 : 3402756-3403382 : positive

Family Information

Homologous gene family
HOM02SEM002217
(30 genes in 18 species)
specific family

Descriptions

eggnog_description
ring finger and CHY zinc finger

Identifiers

Type Value
tid268226
idmRNA11143
GeneNamegene11141

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010106
IEA
EggNOGmappercellular response to iron ion starvation
GO:0016567
IEA
EggNOGmapperprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046914
IEA
PLAZA Homology (enrichment)transition metal ion binding HOM02SEM002217
GO:0008270
IEA
EggNOGmapperzinc ion binding
GO:0046872
IEA
PLAZA Homology (enrichment)metal ion binding HOM02SEM002217
GO:0043167
IEA
PLAZA Homology (enrichment)ion binding HOM02SEM002217
GO:0043169
IEA
PLAZA Homology (enrichment)cation binding HOM02SEM002217
GO:0005488
IEA
PLAZA Homology (enrichment)binding HOM02SEM002217
GO:0016881
IEA
EggNOGmapperacid-amino acid ligase activity
GO:0004842
IEA
EggNOGmapperubiquitin-protein transferase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR001841Zinc finger, RING-type
IPR039512RCHY1, zinc-ribbon
IPR017921Zinc finger, CTCHY-type
IPR037275Zinc finger, CTCHY-type superfamily

No MapMan annotations defined for this gene.
KeggID Description
K10144RCHY1, PIRH2; RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]
K16276K16276, BTS; zinc finger protein-like protein
No chloroplast target sequence found.