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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ccr98460
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ccr98460
Chondrus crispus
5.0e-263
907.9
447
100.0
Naga_100083g10
Nannochloropsis gaditana
2.7e-120
433.7
321
66.4
Ec-17_001430
Ectocarpus siliculosus
3.6e-120
433.3
333
62.2
fso31480
Fistulifera solaris
3.3e-118
426.8
348
60.6
fso118580
Fistulifera solaris
2.8e-117
423.7
348
60.3
AA0020G01140
Aureococcus anophagefferens
3.8e-114
413.3
304
65.5
emh649900
Emiliania huxleyi
1.5e-113
411.4
325
63.1
AA0066G00030
Aureococcus anophagefferens
1.9e-113
411.0
312
63.8
emh201340
Emiliania huxleyi
4.2e-113
409.8
325
62.8
Sro493_g154120
Seminavis robusta
1.2e-112
408.3
328
62.5
sya00G63770
Synedra acus
4.7e-112
406.4
350
60.0
ps00G178350
Pseudo-nitzschia multiseries
4.0e-111
403.3
338
59.8
gene3850
Fragilariopsis cylindrus
6.8e-111
402.5
329
60.5
sya00G46130
Synedra acus
6.8e-111
402.5
347
59.7
gsu87890
Galdieria sulphuraria
2.0e-110
401.0
300
62.0
gene4559
Fragilariopsis cylindrus
3.4e-110
400.2
329
60.2
PSNMU-V1.4_AUG-EV-PASAV3_0020490
Pseudo-nitzschia multistriata
4.4e-110
399.8
368
56.5
Pp3c13_12220
Physcomitrella patens
6.3e-109
396.0
337
57.3
Cre05.g238322
Chlamydomonas reinhardtii
7.7e-107
389.0
322
58.4
ptri43650
Phaeodactylum tricornutum
1.0e-106
388.7
392
50.8
tho98620
Thalassiosira oceanica
1.2e-104
381.7
360
55.0
AT2G25840
Arabidopsis thaliana
3.6e-104
380.2
315
59.0
CM02G00100
Cyanidioschyzon merolae
4.7e-104
379.8
356
55.6
CC00G101980
Cyclotella cryptica
4.0e-103
376.7
351
55.6
tps114570
Thalassiosira pseudonana
1.3e-101
371.7
306
61.4
sya00G29180
Synedra acus
1.9e-68
261.5
301
48.8
pte402480
Paramecium tetraurelia
1.8e-63
245.0
307
44.6
ENSG00000116874
Homo sapiens
1.9e-60
235.0
313
39.3
SPAC3G9.13c
Schizosaccharomyces pombe
2.3e-58
228.0
321
38.6
FBgn0036763
Drosophila melanogaster
9.6e-57
222.6
312
40.1
YDR268W
Saccharomyces cerevisiae strain S288C
3.3e-49
197.6
322
37.0
WBGene00006946
Caenorhabditis elegans
1.0e-42
176.0
297
35.7
Pp3c6_19930
Physcomitrella patens
4.1e-07
57.8
325
22.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing