Gene: Sro493_g154120 (Seminavis robusta)

Overview top

Gene Identifier
Sro493_g154120
Transcript Identifier
Sro493_g154120.1
Gene Type
Coding gene
Location
Sro_contig493 : 38988-40463 : negative

Family Information

Homologous gene family
HOM02SEM001990
(32 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM002073
(32 genes in 26 species)
specific family

Descriptions

eggnog_description
tryptophanyltRNA synthetase
annomine_description
Tryptophan--tRNA ligase

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006436
IEA
InterProtryptophanyl-tRNA aminoacylation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction AT2G25840
GO:0048827
IEA
EggNOGmapperphyllome development
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process AT2G25840
GO:0035670
IEA
EggNOGmapperplant-type ovary development
GO:0140053
IEA
PLAZA Integrative Orthologymitochondrial gene expression YDR268W
GO:0048608
IEA
PLAZA Integrative Orthologyreproductive structure development AT2G25840
GO:0090567
IEA
PLAZA Integrative Orthologyreproductive shoot system development AT2G25840
GO:0048481
IEA
EggNOGmapperplant ovule development
GO:0032543
IEA
PLAZA Integrative Orthologymitochondrial translation YDR268W
GO:0070127
IEA
PLAZA Integrative OrthologytRNA aminoacylation for mitochondrial protein translation YDR268W
GO:0099402
IEA
PLAZA Integrative Orthologyplant organ development AT2G25840
GO:0009908
IEA
PLAZA Integrative Orthologyflower development AT2G25840
GO:0048367
IEA
EggNOGmappershoot system development
GO:0048467
IEA
PLAZA Integrative Orthologygynoecium development AT2G25840
GO:0070183
IEA
EggNOGmappermitochondrial tryptophanyl-tRNA aminoacylation
GO:0048440
IEA
PLAZA Integrative Orthologycarpel development AT2G25840
GO:0003006
IEA
PLAZA Integrative Orthologydevelopmental process involved in reproduction AT2G25840
GO:0061458
IEA
EggNOGmapperreproductive system development
GO:0048437
IEA
PLAZA Integrative Orthologyfloral organ development AT2G25840
GO:0048438
IEA
PLAZA Integrative Orthologyfloral whorl development AT2G25840
GO:0009791
IEA
PLAZA Integrative Orthologypost-embryonic development AT2G25840
GO:0000959
IEA
PLAZA Integrative Orthologymitochondrial RNA metabolic process YDR268W
GO:0048569
IEA
EggNOGmapperpost-embryonic animal organ development
GO:0048514
IEA
EggNOGmapperblood vessel morphogenesis
GO:0040010
IEA
EggNOGmapperpositive regulation of growth rate
GO:0001570
IEA
EggNOGmappervasculogenesis
GO:0009790
IEA
EggNOGmapperembryo development
GO:0007005
IEA
EggNOGmappermitochondrion organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
EggNOGmapperATP binding
GO:0005524
IEA
InterProATP binding
GO:0004830
IEA
EggNOGmappertryptophan-tRNA ligase activity
GO:0004830
IEA
InterProtryptophan-tRNA ligase activity
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0042803
IEA
EggNOGmapperprotein homodimerization activity
GO:0035639
IEA
EggNOGmapperpurine ribonucleoside triphosphate binding
GO:0030554
IEA
EggNOGmapperadenyl nucleotide binding
GO:0032550
IEA
EggNOGmapperpurine ribonucleoside binding
GO:0032559
IEA
EggNOGmapperadenyl ribonucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0071944
IEA
PLAZA Integrative Orthologycell periphery ENSG00000116874
GO:0016020
IEA
PLAZA Integrative Orthologymembrane ENSG00000116874
GO:0005739
IEA
EggNOGmappermitochondrion
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen SPAC3G9.13c
GO:0005759
IEA
EggNOGmappermitochondrial matrix
GO:0005886
IEA
PLAZA Integrative Orthologyplasma membrane ENSG00000116874
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPAC3G9.13c
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPAC3G9.13c
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen SPAC3G9.13c
GO:0044429
IEA
PLAZA Integrative Orthologymitochondrial part SPAC3G9.13c
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen SPAC3G9.13c
GO:0009507
IEA
EggNOGmapperchloroplast
GO:0044435
IEA
PLAZA Integrative Orthologyplastid part AT2G25840
GO:0009532
IEA
PLAZA Integrative Orthologyplastid stroma AT2G25840
GO:0044434
IEA
PLAZA Integrative Orthologychloroplast part AT2G25840
GO:0009570
IEA
EggNOGmapperchloroplast stroma
GO:0020011
IEA
EggNOGmapperapicoplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002306Tryptophan-tRNA ligase
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR024109Tryptophan-tRNA ligase, bacterial-type
IPR002305Aminoacyl-tRNA synthetase, class Ic
IPR001412Aminoacyl-tRNA synthetase, class I, conserved site

No MapMan annotations defined for this gene.
KeggID Description
K02946RP-S10, MRPS10, rpsJ; small subunit ribosomal protein S10
K01867WARS, trpS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K13346PEX10; peroxin-10
Cleavage position Sequence
18 RTARSFTPTGSMAVVTTTRRTIRTT