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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro695_g188680
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro695_g188680
Seminavis robusta
9.1e-242
837.8
604
100.0
ptri69840
Phaeodactylum tricornutum
2.2e-118
427.9
347
61.7
fso199510
Fistulifera solaris
2.7e-113
411.0
339
62.5
fso73640
Fistulifera solaris
1.8e-112
408.3
341
62.8
CC00G149660
Cyclotella cryptica
5.5e-106
386.7
329
59.9
tps142420
Thalassiosira pseudonana
2.8e-102
374.4
248
72.2
ps00G65070
Pseudo-nitzschia multiseries
2.1e-97
358.2
309
58.3
Sro70_g039030
Seminavis robusta
2.1e-97
358.2
299
58.9
CC00G122160
Cyclotella cryptica
8.8e-96
352.8
247
70.0
ptri72160
Phaeodactylum tricornutum
2.2e-94
348.2
300
57.3
sya00G196410
Synedra acus
3.7e-94
347.4
315
55.2
gene18213
Fragilariopsis cylindrus
1.4e-93
345.5
303
57.1
tps193950
Thalassiosira pseudonana
1.9e-90
335.1
248
67.3
fso43770
Fistulifera solaris
1.0e-88
329.3
330
53.0
fso64760
Fistulifera solaris
1.0e-88
329.3
330
53.0
sya00G00440
Synedra acus
9.8e-71
269.6
176
66.5
ps00G33510
Pseudo-nitzschia multiseries
6.4e-70
266.9
255
46.7
sya00G161050
Synedra acus
1.1e-69
266.2
262
46.6
fso77080
Fistulifera solaris
1.9e-69
265.4
263
46.8
tps130000
Thalassiosira pseudonana
4.1e-69
264.2
249
48.2
Sro99_g050950
Seminavis robusta
5.4e-69
263.8
254
46.9
fso77050
Fistulifera solaris
9.2e-69
263.1
265
49.1
fso191720
Fistulifera solaris
1.2e-68
262.7
265
49.1
ptri130290
Phaeodactylum tricornutum
1.6e-68
262.3
257
45.5
gene16313
Fragilariopsis cylindrus
6.0e-68
260.4
255
45.9
Sro968_g226070
Seminavis robusta
6.6e-67
256.9
256
45.7
fso160310
Fistulifera solaris
3.3e-66
254.6
258
46.5
tho217020
Thalassiosira oceanica
1.2e-63
246.1
251
47.4
tho328140
Thalassiosira oceanica
2.6e-47
191.8
297
39.7
Sro9_g007140
Seminavis robusta
3.0e-43
178.3
152
53.9
FBgn0031816
Drosophila melanogaster
4.3e-34
147.9
255
34.9
ENSG00000163743
Homo sapiens
2.8e-33
145.2
205
35.1
CC00G69060
Cyclotella cryptica
1.3e-30
136.3
156
39.7
CC00G86210
Cyclotella cryptica
3.0e-27
125.2
254
30.7
tps146910
Thalassiosira pseudonana
3.9e-27
124.8
218
30.7
AT1G18910
Arabidopsis thaliana
8.7e-27
123.6
248
33.5
fso155640
Fistulifera solaris
1.9e-26
122.5
253
29.6
AT3G62970
Arabidopsis thaliana
3.3e-26
121.7
248
34.3
AT3G18290
Arabidopsis thaliana
8.2e-25
117.1
270
28.9
AT1G74770
Arabidopsis thaliana
1.1e-24
116.7
248
29.4
CM13G01410
Cyanidioschyzon merolae
1.1e-24
116.7
251
33.9
ps00G05920
Pseudo-nitzschia multiseries
6.9e-24
114.0
255
34.5
SPAC2F3.16
Schizosaccharomyces pombe
6.9e-24
114.0
210
34.3
Cre17.g718300
Chlamydomonas reinhardtii
1.2e-23
113.2
250
35.6
Ec-26_004520
Ectocarpus siliculosus
2.0e-23
112.5
285
33.0
ccr161060
Chondrus crispus
3.4e-23
111.7
273
31.1
Pp3c14_5600
Physcomitrella patens
1.4e-21
106.3
247
32.4
Pp3c6_1960
Physcomitrella patens
3.2e-21
105.1
251
33.1
Pp3c10_4820
Physcomitrella patens
4.2e-21
104.8
251
31.5
Pp3c2_31820
Physcomitrella patens
4.2e-21
104.8
249
34.1
Pp3c1_6070
Physcomitrella patens
7.1e-21
104.0
248
32.7
Naga_100090g9
Nannochloropsis gaditana
2.1e-20
102.4
254
27.6
Pp3c11_6970
Physcomitrella patens
3.5e-20
101.7
253
32.0
Pp3c25_14501
Physcomitrella patens
6.1e-20
100.9
251
32.3
Pp3c25_14500
Physcomitrella patens
6.1e-20
100.9
251
32.3
ccr65580
Chondrus crispus
2.3e-19
99.0
253
28.1
AT5G18650
Arabidopsis thaliana
5.1e-19
97.8
248
31.0
gsu76240
Galdieria sulphuraria
5.1e-19
97.8
220
32.3
fso150310
Fistulifera solaris
3.7e-17
91.7
192
28.1
pte243060
Paramecium tetraurelia
4.8e-17
91.3
253
31.2
gene11141
Fragilariopsis cylindrus
1.1e-16
90.1
174
35.6
AT5G25560
Arabidopsis thaliana
3.1e-16
88.6
225
33.8
pte760660
Paramecium tetraurelia
2.5e-10
68.9
256
28.9
Sro345_g122370
Seminavis robusta
6.9e-08
60.8
109
30.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (6 genes)
Synedra acus (3 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing