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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Naga_100026g49
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Naga_100026g49
Nannochloropsis gaditana
0.0e+00
1157.9
584
100.0
ptri52210
Phaeodactylum tricornutum
8.1e-181
635.2
568
59.9
Sro791_g202920
Seminavis robusta
2.4e-180
633.6
470
68.1
sya00G100340
Synedra acus
6.4e-178
625.5
553
60.4
ps00G10380
Pseudo-nitzschia multiseries
9.3e-177
621.7
500
64.2
Ec-16_001810
Ectocarpus siliculosus
3.5e-176
619.8
475
66.5
fso173340
Fistulifera solaris
4.6e-176
619.4
459
65.8
fso183330
Fistulifera solaris
4.6e-176
619.4
459
65.8
gene15177
Fragilariopsis cylindrus
7.8e-176
618.6
500
62.6
tps130380
Thalassiosira pseudonana
2.8e-173
610.1
493
61.9
tho150540
Thalassiosira oceanica
1.4e-172
607.8
574
57.0
emh359520
Emiliania huxleyi
6.9e-172
605.5
523
59.7
emh232420
Emiliania huxleyi
6.9e-172
605.5
523
59.7
AA0006G04030
Aureococcus anophagefferens
4.0e-164
579.7
489
60.7
ccr94680
Chondrus crispus
4.9e-162
572.8
533
57.6
Pp3c1_35170
Physcomitrella patens
2.2e-154
547.4
488
58.6
gsu123150
Galdieria sulphuraria
7.9e-152
538.9
576
51.4
AT4G17300
Arabidopsis thaliana
1.4e-148
528.1
488
56.4
CM18G02050
Cyanidioschyzon merolae
2.3e-143
510.8
509
55.6
Naga_100047g21
Nannochloropsis gaditana
4.5e-131
469.9
491
50.9
pte354190
Paramecium tetraurelia
1.3e-130
468.4
471
52.9
PSNMU-V1.4_AUG-EV-PASAV3_0041600
Pseudo-nitzschia multistriata
3.2e-129
463.8
316
73.1
AT1G70980
Arabidopsis thaliana
1.2e-128
461.8
544
47.2
Ec-17_000510
Ectocarpus siliculosus
8.8e-127
455.7
536
47.9
pte518820
Paramecium tetraurelia
8.8e-127
455.7
474
50.8
AT5G56680
Arabidopsis thaliana
3.7e-125
450.3
572
46.0
pte438960
Paramecium tetraurelia
1.8e-124
448.0
474
50.2
ps00G108750
Pseudo-nitzschia multiseries
1.6e-123
444.9
531
45.6
Pp3c12_7710
Physcomitrella patens
2.0e-123
444.5
536
46.5
PSNMU-V1.4_AUG-EV-PASAV3_0059610
Pseudo-nitzschia multistriata
7.7e-123
442.6
531
45.0
Pp3c12_7760
Physcomitrella patens
7.7e-123
442.6
536
46.1
gene20945
Fragilariopsis cylindrus
1.0e-122
442.2
504
47.2
gene10186
Fragilariopsis cylindrus
1.0e-122
442.2
504
47.2
Cre03.g193800
Chlamydomonas reinhardtii
3.8e-122
440.3
499
48.9
sya00G173520
Synedra acus
1.5e-118
428.3
573
42.4
ptri218160
Phaeodactylum tricornutum
4.8e-117
423.3
566
42.6
emh194680
Emiliania huxleyi
7.5e-110
399.4
350
58.0
emh452810
Emiliania huxleyi
1.0e-106
389.0
362
55.8
ENSG00000137513
Homo sapiens
1.0e-106
389.0
476
46.2
CC00G146270
Cyclotella cryptica
4.0e-87
323.9
305
57.7
AT3G07420
Arabidopsis thaliana
2.9e-85
317.8
536
37.1
SPBC1198.10c
Schizosaccharomyces pombe
3.9e-74
280.8
459
37.5
YCR024C
Saccharomyces cerevisiae strain S288C
3.1e-71
271.2
474
34.4
CC00G24230
Cyclotella cryptica
1.1e-65
252.7
160
74.4
fso132970
Fistulifera solaris
2.0e-62
241.9
515
33.8
FBgn0034177
Drosophila melanogaster
4.4e-62
240.7
459
34.6
tho127860
Thalassiosira oceanica
9.3e-60
233.0
522
32.8
fso13780
Fistulifera solaris
1.2e-59
232.6
528
32.0
CC00G176020
Cyclotella cryptica
4.6e-59
230.7
531
33.1
Sro340_g121190
Seminavis robusta
1.5e-57
225.7
542
30.1
WBGene00013447
Caenorhabditis elegans
8.1e-56
219.9
448
32.4
tps140990
Thalassiosira pseudonana
2.9e-53
211.5
357
36.7
WBGene00003815
Caenorhabditis elegans
1.4e-52
209.1
462
31.4
gsu109170
Galdieria sulphuraria
1.4e-52
209.1
475
30.1
ccr56040
Chondrus crispus
7.1e-52
206.8
481
30.1
CM13G00980
Cyanidioschyzon merolae
4.6e-51
204.1
478
31.2
YHR019C
Saccharomyces cerevisiae strain S288C
3.3e-49
198.0
485
29.7
CC00G207840
Cyclotella cryptica
9.0e-47
189.9
117
76.9
ENSG00000134440
Homo sapiens
4.5e-46
187.6
463
29.2
FBgn0086443
Drosophila melanogaster
4.9e-45
184.1
456
29.4
SPBC1773.10c
Schizosaccharomyces pombe
1.2e-38
162.9
463
29.4
gsu109190
Galdieria sulphuraria
2.6e-38
161.8
438
28.5
tps60240
Thalassiosira pseudonana
3.4e-30
134.8
349
29.5
fso01010
Fistulifera solaris
2.5e-28
128.6
349
29.8
fso188120
Fistulifera solaris
2.5e-28
128.6
349
29.8
CC00G36660
Cyclotella cryptica
4.6e-27
124.4
350
28.9
tho78980
Thalassiosira oceanica
6.1e-27
124.0
501
26.5
AT4G26870
Arabidopsis thaliana
3.9e-26
121.3
350
28.3
PSNMU-V1.4_AUG-EV-PASAV3_0037510
Pseudo-nitzschia multistriata
5.1e-26
120.9
350
28.6
ENSG00000115866
Homo sapiens
6.7e-26
120.6
505
25.3
Sro1100_g241300
Seminavis robusta
8.8e-26
120.2
353
28.3
Ec-19_005440
Ectocarpus siliculosus
7.4e-25
117.1
425
28.2
Pp3c21_10900
Physcomitrella patens
7.4e-25
117.1
484
24.8
ps00G153620
Pseudo-nitzschia multiseries
7.4e-25
117.1
351
29.9
ptri107760
Phaeodactylum tricornutum
9.7e-25
116.7
350
28.0
sya00G51230
Synedra acus
1.7e-24
115.9
353
28.6
sya00G200610
Synedra acus
1.7e-24
115.9
353
28.6
Cre06.g279150
Chlamydomonas reinhardtii
2.8e-24
115.2
352
28.4
fso174020
Fistulifera solaris
2.8e-24
115.2
455
26.4
ccr22700
Chondrus crispus
6.3e-24
114.0
353
28.3
CM10G02200
Cyanidioschyzon merolae
6.3e-24
114.0
341
27.3
fso141070
Fistulifera solaris
1.1e-23
113.2
455
26.2
WBGene00001094
Caenorhabditis elegans
1.8e-23
112.5
357
28.6
Naga_100431g3
Nannochloropsis gaditana
1.8e-23
112.5
344
28.2
gene15008
Fragilariopsis cylindrus
2.4e-23
112.1
350
27.4
YLL018C
Saccharomyces cerevisiae strain S288C
1.5e-22
109.4
351
27.1
Ec-06_003810
Ectocarpus siliculosus
2.6e-22
108.6
350
28.3
ptri13530
Phaeodactylum tricornutum
3.4e-22
108.2
289
30.4
AA0023G00600
Aureococcus anophagefferens
7.7e-22
107.1
353
26.6
pte493770
Paramecium tetraurelia
1.3e-21
106.3
352
27.6
gene528
Fragilariopsis cylindrus
1.7e-21
105.9
342
27.5
AT4G31180
Arabidopsis thaliana
2.2e-21
105.5
351
26.8
pte36220
Paramecium tetraurelia
3.8e-21
104.8
518
24.3
SPCC1223.07c
Schizosaccharomyces pombe
3.8e-21
104.8
366
25.1
ps00G174750
Pseudo-nitzschia multiseries
5.0e-21
104.4
342
28.4
sya00G104700
Synedra acus
6.5e-21
104.0
347
26.8
Naga_100047g38
Nannochloropsis gaditana
2.5e-20
102.1
351
25.6
CC00G157620
Cyclotella cryptica
3.2e-20
101.7
350
26.9
tps185020
Thalassiosira pseudonana
1.2e-19
99.8
421
25.9
FBgn0002069
Drosophila melanogaster
6.1e-19
97.4
362
26.5
emh642420
Emiliania huxleyi
5.1e-18
94.4
525
25.0
gsu78900
Galdieria sulphuraria
2.0e-17
92.4
335
24.8
AA0002G00520
Aureococcus anophagefferens
3.1e-15
85.1
278
30.6
AT1G68420
Arabidopsis thaliana
6.5e-13
77.4
77
48.1
Sro443_g143980
Seminavis robusta
3.2e-12
75.1
365
25.5
fso151900
Fistulifera solaris
1.8e-07
59.3
498
21.7
fso168480
Fistulifera solaris
4.1e-07
58.2
498
21.5
AT3G13490
Arabidopsis thaliana
1.2e-06
56.6
499
22.6
ptri32640
Phaeodactylum tricornutum
2.0e-06
55.8
485
20.4
tho115480
Thalassiosira oceanica
2.6e-06
55.5
99
32.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (5 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (6 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (4 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (8 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (4 genes)
Synedra acus (5 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing