Gene: Naga_100026g49 (Nannochloropsis gaditana)

Overview top

Gene Identifier
Naga_100026g49
Transcript Identifier
EWM30392
Gene Type
Coding gene
Location
1 : 683929-686032 : positive

Family Information

Homologous gene family
HOM02SEM000631
(65 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM000907
(53 genes in 26 species)
specific family

Descriptions

gene_descr
asparaginyl-trna synthetase

Identifiers

Type Value
pidEWM30392
UniprotW7TW83

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006421
IEA
InterProasparaginyl-tRNA aminoacylation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process WBGene00003815
GO:0010605
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule metabolic process WBGene00003815
GO:0006357
IEA
PLAZA Integrative Orthologyregulation of transcription by RNA polymerase II WBGene00003815
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction AT4G17300
GO:0046686
IEA
PLAZA Integrative Orthologyresponse to cadmium ion AT5G56680
GO:0006355
IEA
PLAZA Integrative Orthologyregulation of transcription, DNA-templated WBGene00003815
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process AT4G17300
GO:0006351
IEA
PLAZA Integrative Orthologytranscription, DNA-templated WBGene00003815
GO:0140053
IEA
PLAZA Integrative Orthologymitochondrial gene expression YCR024C
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process AT4G17300
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus AT5G56680
GO:0010035
IEA
PLAZA Integrative Orthologyresponse to inorganic substance AT5G56680
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process AT4G17300
GO:0010558
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule biosynthetic process WBGene00003815
GO:0010038
IEA
PLAZA Integrative Orthologyresponse to metal ion AT5G56680
GO:0010556
IEA
PLAZA Integrative Orthologyregulation of macromolecule biosynthetic process WBGene00003815
GO:0070145
IEA
PLAZA Integrative Orthologymitochondrial asparaginyl-tRNA aminoacylation YCR024C
GO:0048467
IEA
PLAZA Integrative Orthologygynoecium development AT4G17300
GO:0000122
IEA
PLAZA Integrative Orthologynegative regulation of transcription by RNA polymerase II WBGene00003815
GO:1903507
IEA
PLAZA Integrative Orthologynegative regulation of nucleic acid-templated transcription WBGene00003815
GO:1903506
IEA
PLAZA Integrative Orthologyregulation of nucleic acid-templated transcription WBGene00003815
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development AT4G17300
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development AT4G17300
GO:0019438
IEA
PLAZA Integrative Orthologyaromatic compound biosynthetic process WBGene00003815
GO:0010468
IEA
PLAZA Integrative Orthologyregulation of gene expression WBGene00003815
GO:0034654
IEA
PLAZA Integrative Orthologynucleobase-containing compound biosynthetic process WBGene00003815
GO:0010629
IEA
PLAZA Integrative Orthologynegative regulation of gene expression WBGene00003815
GO:0048731
IEA
PLAZA Integrative Orthologysystem development AT4G17300
GO:0009889
IEA
PLAZA Integrative Orthologyregulation of biosynthetic process WBGene00003815
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical AT5G56680
GO:0048608
IEA
PLAZA Integrative Orthologyreproductive structure development AT4G17300
GO:2001141
IEA
PLAZA Integrative Orthologyregulation of RNA biosynthetic process WBGene00003815
GO:0070127
IEA
PLAZA Integrative OrthologytRNA aminoacylation for mitochondrial protein translation YCR024C
GO:0009908
IEA
PLAZA Integrative Orthologyflower development AT4G17300
GO:0048440
IEA
PLAZA Integrative Orthologycarpel development AT4G17300
GO:0003006
IEA
PLAZA Integrative Orthologydevelopmental process involved in reproduction AT4G17300
GO:0051171
IEA
PLAZA Integrative Orthologyregulation of nitrogen compound metabolic process WBGene00003815
GO:0006366
IEA
PLAZA Integrative Orthologytranscription by RNA polymerase II WBGene00003815
GO:0048316
IEA
PLAZA Integrative Orthologyseed development AT5G56680
GO:0048437
IEA
PLAZA Integrative Orthologyfloral organ development AT4G17300
GO:0051172
IEA
PLAZA Integrative Orthologynegative regulation of nitrogen compound metabolic process WBGene00003815
GO:0048438
IEA
PLAZA Integrative Orthologyfloral whorl development AT4G17300
GO:0031324
IEA
PLAZA Integrative Orthologynegative regulation of cellular metabolic process WBGene00003815
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process WBGene00003815
GO:0080090
IEA
PLAZA Integrative Orthologyregulation of primary metabolic process WBGene00003815
GO:0031326
IEA
PLAZA Integrative Orthologyregulation of cellular biosynthetic process WBGene00003815
GO:0032774
IEA
PLAZA Integrative OrthologyRNA biosynthetic process WBGene00003815
GO:0031327
IEA
PLAZA Integrative Orthologynegative regulation of cellular biosynthetic process WBGene00003815
GO:0048827
IEA
PLAZA Integrative Orthologyphyllome development AT4G17300
GO:0090567
IEA
PLAZA Integrative Orthologyreproductive shoot system development AT4G17300
GO:0060255
IEA
PLAZA Integrative Orthologyregulation of macromolecule metabolic process WBGene00003815
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process WBGene00003815
GO:0032543
IEA
PLAZA Integrative Orthologymitochondrial translation YCR024C
GO:0099402
IEA
PLAZA Integrative Orthologyplant organ development AT4G17300
GO:0018130
IEA
PLAZA Integrative Orthologyheterocycle biosynthetic process WBGene00003815
GO:0009890
IEA
PLAZA Integrative Orthologynegative regulation of biosynthetic process WBGene00003815
GO:1901362
IEA
PLAZA Integrative Orthologyorganic cyclic compound biosynthetic process WBGene00003815
GO:0009892
IEA
PLAZA Integrative Orthologynegative regulation of metabolic process WBGene00003815
GO:0019219
IEA
PLAZA Integrative Orthologyregulation of nucleobase-containing compound metabolic process WBGene00003815
GO:0000959
IEA
PLAZA Integrative Orthologymitochondrial RNA metabolic process YCR024C
GO:0097659
IEA
PLAZA Integrative Orthologynucleic acid-templated transcription WBGene00003815
GO:0051252
IEA
PLAZA Integrative Orthologyregulation of RNA metabolic process WBGene00003815
GO:0051253
IEA
PLAZA Integrative Orthologynegative regulation of RNA metabolic process WBGene00003815
GO:0045934
IEA
PLAZA Integrative Orthologynegative regulation of nucleobase-containing compound metabolic process WBGene00003815
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process WBGene00003815
GO:0035670
IEA
PLAZA Integrative Orthologyplant-type ovary development AT4G17300
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation WBGene00003815
GO:0010154
IEA
PLAZA Integrative Orthologyfruit development AT5G56680
GO:0048481
IEA
PLAZA Integrative Orthologyplant ovule development AT4G17300
GO:2000112
IEA
PLAZA Integrative Orthologyregulation of cellular macromolecule biosynthetic process WBGene00003815
GO:2000113
IEA
PLAZA Integrative Orthologynegative regulation of cellular macromolecule biosynthetic process WBGene00003815
GO:0048367
IEA
PLAZA Integrative Orthologyshoot system development AT4G17300
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process WBGene00003815
GO:0045892
IEA
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated WBGene00003815
GO:0061458
IEA
PLAZA Integrative Orthologyreproductive system development AT4G17300
GO:1902679
IEA
PLAZA Integrative Orthologynegative regulation of RNA biosynthetic process WBGene00003815
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process WBGene00003815
GO:0009791
IEA
PLAZA Integrative Orthologypost-embryonic development AT4G17300
GO:0009793
IEA
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G56680
GO:0009790
IEA
PLAZA Integrative Orthologyembryo development AT5G56680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0004816
IEA
InterProasparagine-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0000049
IEA
PLAZA Integrative OrthologytRNA binding SPBC1198.10c
GO:0003723
IEA
PLAZA Integrative OrthologyRNA binding SPBC1198.10c

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen SPBC1198.10c
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPBC1198.10c
GO:0044421
IEA
PLAZA Integrative Orthologyextracellular region part ENSG00000134440
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part ENSG00000137513
GO:0044429
IEA
PLAZA Integrative Orthologymitochondrial part SPBC1198.10c
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm ENSG00000137513
GO:0009570
IEA
PLAZA Integrative Orthologychloroplast stroma AT4G17300
GO:0005829
IEA
PLAZA Integrative Orthologycytosol SPBC1773.10c
GO:0009507
IEA
PLAZA Integrative Orthologychloroplast AT3G07420
GO:1903561
IEA
PLAZA Integrative Orthologyextracellular vesicle ENSG00000134440
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion SPBC1198.10c
GO:0005615
IEA
PLAZA Integrative Orthologyextracellular space ENSG00000134440
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen SPBC1198.10c
GO:0009536
IEA
PLAZA Integrative Orthologyplastid AT3G07420
GO:0070062
IEA
PLAZA Integrative Orthologyextracellular exosome ENSG00000134440
GO:0005576
IEA
PLAZA Integrative Orthologyextracellular region ENSG00000134440
GO:0009532
IEA
PLAZA Integrative Orthologyplastid stroma AT4G17300
GO:0031982
IEA
PLAZA Integrative Orthologyvesicle ENSG00000134440
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen ENSG00000137513
GO:0005759
IEA
PLAZA Integrative Orthologymitochondrial matrix SPBC1198.10c
GO:0005634
IEA
PLAZA Integrative Orthologynucleus ENSG00000137513
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPBC1198.10c
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen SPBC1198.10c
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPBC1773.10c
GO:0043230
IEA
PLAZA Integrative Orthologyextracellular organelle ENSG00000134440
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPBC1198.10c
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPBC1198.10c
GO:0044435
IEA
PLAZA Integrative Orthologyplastid part AT4G17300
GO:0044434
IEA
PLAZA Integrative Orthologychloroplast part AT4G17300
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPBC1198.10c
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPBC1198.10c

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR004522Asparagine-tRNA ligase
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR002312Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR006195Aminoacyl-tRNA synthetase, class II
IPR012340Nucleic acid-binding, OB-fold

No MapMan annotations defined for this gene.
KeggID Description
K01893NARS, asnS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
No chloroplast target sequence found.