Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G146270
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G146270
Cyclotella cryptica
2.4e-213
742.7
388
100.0
tho150540
Thalassiosira oceanica
9.9e-143
508.1
367
74.9
tps130380
Thalassiosira pseudonana
5.4e-141
502.3
277
89.2
ptri52210
Phaeodactylum tricornutum
2.3e-123
443.7
292
77.1
sya00G100340
Synedra acus
2.2e-118
427.2
304
73.0
gene15177
Fragilariopsis cylindrus
1.6e-116
421.0
294
73.5
ps00G10380
Pseudo-nitzschia multiseries
6.7e-115
415.6
294
73.8
Sro791_g202920
Seminavis robusta
3.2e-109
396.7
282
70.6
fso183330
Fistulifera solaris
1.6e-108
394.4
272
72.4
fso173340
Fistulifera solaris
6.1e-108
392.5
271
72.3
Ec-16_001810
Ectocarpus siliculosus
1.2e-87
325.1
290
60.7
Naga_100026g49
Nannochloropsis gaditana
2.7e-87
323.9
305
57.7
AA0006G04030
Aureococcus anophagefferens
3.5e-87
323.6
292
59.6
ccr94680
Chondrus crispus
1.4e-80
301.6
322
54.3
emh359520
Emiliania huxleyi
2.3e-78
294.3
313
52.1
emh232420
Emiliania huxleyi
2.3e-78
294.3
313
52.1
CM18G02050
Cyanidioschyzon merolae
2.8e-76
287.3
262
58.4
AT4G17300
Arabidopsis thaliana
4.9e-73
276.6
264
56.1
Pp3c1_35170
Physcomitrella patens
8.3e-73
275.8
262
55.7
gsu123150
Galdieria sulphuraria
1.0e-70
268.9
285
53.7
Naga_100047g21
Nannochloropsis gaditana
4.3e-61
236.9
365
44.7
gene20945
Fragilariopsis cylindrus
9.5e-61
235.7
296
45.9
gene10186
Fragilariopsis cylindrus
9.5e-61
235.7
296
45.9
Ec-17_000510
Ectocarpus siliculosus
8.0e-60
232.6
281
47.3
pte354190
Paramecium tetraurelia
8.0e-60
232.6
261
48.3
ps00G108750
Pseudo-nitzschia multiseries
1.8e-59
231.5
317
42.9
AT1G70980
Arabidopsis thaliana
1.5e-58
228.4
335
43.9
Pp3c12_7710
Physcomitrella patens
2.6e-58
227.6
323
44.9
PSNMU-V1.4_AUG-EV-PASAV3_0059610
Pseudo-nitzschia multistriata
1.7e-57
224.9
310
42.9
AT5G56680
Arabidopsis thaliana
2.9e-57
224.2
334
43.7
ptri218160
Phaeodactylum tricornutum
2.9e-57
224.2
313
43.1
Pp3c12_7760
Physcomitrella patens
4.9e-57
223.4
323
44.0
pte518820
Paramecium tetraurelia
1.4e-56
221.9
266
45.9
sya00G173520
Synedra acus
1.6e-55
218.4
370
40.0
pte438960
Paramecium tetraurelia
4.3e-53
210.3
267
43.8
Cre03.g193800
Chlamydomonas reinhardtii
5.6e-53
209.9
272
47.1
ENSG00000137513
Homo sapiens
3.4e-50
200.7
267
41.9
emh452810
Emiliania huxleyi
1.5e-45
185.3
147
63.9
emh194680
Emiliania huxleyi
2.5e-45
184.5
147
63.9
PSNMU-V1.4_AUG-EV-PASAV3_0041600
Pseudo-nitzschia multistriata
1.4e-40
168.7
113
76.1
SPBC1198.10c
Schizosaccharomyces pombe
4.1e-40
167.2
262
39.3
AT3G07420
Arabidopsis thaliana
3.9e-38
160.6
317
35.0
YCR024C
Saccharomyces cerevisiae strain S288C
3.3e-37
157.5
257
37.0
FBgn0034177
Drosophila melanogaster
4.7e-36
153.7
266
36.8
CC00G176020
Cyclotella cryptica
1.6e-28
128.6
320
32.8
WBGene00013447
Caenorhabditis elegans
1.3e-25
119.0
252
32.1
fso132970
Fistulifera solaris
3.8e-25
117.5
287
32.8
fso13780
Fistulifera solaris
2.1e-23
111.7
315
29.8
tho127860
Thalassiosira oceanica
1.8e-22
108.6
294
30.6
YHR019C
Saccharomyces cerevisiae strain S288C
3.3e-21
104.4
289
29.1
Sro340_g121190
Seminavis robusta
7.4e-21
103.2
319
27.6
WBGene00003815
Caenorhabditis elegans
3.7e-20
100.9
301
31.2
gsu109170
Galdieria sulphuraria
2.6e-18
94.7
281
27.0
gsu109190
Galdieria sulphuraria
2.6e-18
94.7
281
27.0
tps140990
Thalassiosira pseudonana
2.6e-18
94.7
160
39.4
ENSG00000134440
Homo sapiens
4.5e-18
94.0
265
28.3
FBgn0086443
Drosophila melanogaster
7.6e-18
93.2
270
28.1
SPBC1773.10c
Schizosaccharomyces pombe
5.5e-16
87.0
268
27.2
ccr56040
Chondrus crispus
9.3e-16
86.3
301
26.6
CM13G00980
Cyanidioschyzon merolae
9.3e-16
86.3
279
28.0
AT1G68420
Arabidopsis thaliana
1.1e-11
72.8
49
67.3
ENSG00000115866
Homo sapiens
1.6e-07
58.9
137
31.4
Ec-19_005440
Ectocarpus siliculosus
2.1e-07
58.5
139
30.9
CC00G36660
Cyclotella cryptica
4.6e-07
57.4
140
28.6
tps60240
Thalassiosira pseudonana
4.6e-07
57.4
140
29.3
Pp3c21_10900
Physcomitrella patens
7.9e-07
56.6
274
25.2
ps00G174750
Pseudo-nitzschia multiseries
7.9e-07
56.6
133
30.1
Cre06.g279150
Chlamydomonas reinhardtii
1.3e-06
55.8
283
23.7
fso01010
Fistulifera solaris
1.8e-06
55.5
140
28.6
fso188120
Fistulifera solaris
1.8e-06
55.5
140
28.6
ptri107760
Phaeodactylum tricornutum
3.0e-06
54.7
136
28.7
Naga_100431g3
Nannochloropsis gaditana
3.9e-06
54.3
128
28.9
WBGene00001094
Caenorhabditis elegans
5.1e-06
53.9
137
28.5
ccr22700
Chondrus crispus
6.7e-06
53.5
129
27.9
CC00G157620
Cyclotella cryptica
6.7e-06
53.5
151
28.5
AT4G26870
Arabidopsis thaliana
8.7e-06
53.1
135
28.9
fso174020
Fistulifera solaris
8.7e-06
53.1
151
28.5
YLL018C
Saccharomyces cerevisiae strain S288C
8.7e-06
53.1
139
28.1
Sro1100_g241300
Seminavis robusta
8.7e-06
53.1
76
44.7
sya00G266370
Synedra acus
8.7e-06
53.1
275
25.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (7 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing