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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT5G56680
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT5G56680
Arabidopsis thaliana
0.0e+00
1147.1
573
100.0
AT1G70980
Arabidopsis thaliana
8.9e-265
914.1
575
80.5
Pp3c12_7710
Physcomitrella patens
3.6e-218
759.2
562
66.2
Pp3c12_7760
Physcomitrella patens
7.6e-216
751.5
551
66.4
Cre03.g193800
Chlamydomonas reinhardtii
4.7e-157
556.2
501
58.7
Pp3c1_35170
Physcomitrella patens
4.1e-145
516.5
551
50.3
ccr94680
Chondrus crispus
8.0e-141
502.3
576
48.6
emh359520
Emiliania huxleyi
4.4e-139
496.5
552
50.0
emh232420
Emiliania huxleyi
4.4e-139
496.5
552
50.0
AT4G17300
Arabidopsis thaliana
1.4e-137
491.5
551
49.2
PSNMU-V1.4_AUG-EV-PASAV3_0059610
Pseudo-nitzschia multistriata
5.4e-137
489.6
592
47.3
sya00G173520
Synedra acus
3.5e-136
486.9
561
48.5
ptri218160
Phaeodactylum tricornutum
1.1e-132
475.3
556
48.7
ps00G108750
Pseudo-nitzschia multiseries
2.0e-131
471.1
561
46.3
gene20945
Fragilariopsis cylindrus
5.8e-131
469.5
558
45.9
gene10186
Fragilariopsis cylindrus
5.8e-131
469.5
558
45.9
gsu123150
Galdieria sulphuraria
7.5e-131
469.2
548
46.4
Ec-17_000510
Ectocarpus siliculosus
9.8e-131
468.8
553
46.8
AT3G07420
Arabidopsis thaliana
3.5e-128
460.3
622
40.8
pte518820
Paramecium tetraurelia
6.0e-128
459.5
534
46.1
Naga_100047g21
Nannochloropsis gaditana
1.7e-127
458.0
558
46.4
Naga_100026g49
Nannochloropsis gaditana
3.0e-127
457.2
572
46.0
CM18G02050
Cyanidioschyzon merolae
3.9e-127
456.8
550
46.4
pte354190
Paramecium tetraurelia
5.6e-126
453.0
536
45.7
pte438960
Paramecium tetraurelia
4.0e-124
446.8
532
44.7
tps130380
Thalassiosira pseudonana
1.1e-121
438.7
538
46.7
tho150540
Thalassiosira oceanica
2.7e-120
434.1
538
45.7
fso173340
Fistulifera solaris
4.6e-120
433.3
530
45.3
fso183330
Fistulifera solaris
4.6e-120
433.3
530
45.3
Sro791_g202920
Seminavis robusta
3.9e-119
430.3
530
45.7
ptri52210
Phaeodactylum tricornutum
1.5e-118
428.3
577
43.3
Ec-16_001810
Ectocarpus siliculosus
3.3e-118
427.2
546
44.1
ps00G10380
Pseudo-nitzschia multiseries
2.4e-116
421.0
539
43.6
sya00G100340
Synedra acus
2.4e-116
421.0
528
45.3
gene15177
Fragilariopsis cylindrus
2.6e-115
417.5
561
43.0
AA0006G04030
Aureococcus anophagefferens
1.2e-107
392.1
547
42.4
emh194680
Emiliania huxleyi
4.0e-100
367.1
416
45.7
emh452810
Emiliania huxleyi
3.2e-97
357.5
427
44.3
ENSG00000137513
Homo sapiens
3.4e-91
337.4
529
40.1
PSNMU-V1.4_AUG-EV-PASAV3_0041600
Pseudo-nitzschia multistriata
7.4e-86
319.7
311
52.1
SPBC1198.10c
Schizosaccharomyces pombe
4.2e-73
277.3
521
36.3
YCR024C
Saccharomyces cerevisiae strain S288C
2.9e-58
228.0
538
29.9
FBgn0034177
Drosophila melanogaster
2.5e-57
224.9
521
31.9
CC00G146270
Cyclotella cryptica
1.2e-56
222.6
334
43.7
Sro340_g121190
Seminavis robusta
6.7e-55
216.9
579
29.2
fso132970
Fistulifera solaris
1.8e-52
208.8
570
29.3
tho127860
Thalassiosira oceanica
4.5e-51
204.1
587
27.8
fso13780
Fistulifera solaris
5.9e-51
203.8
582
28.7
CC00G176020
Cyclotella cryptica
2.9e-50
201.4
585
28.0
tps140990
Thalassiosira pseudonana
4.0e-47
191.0
428
30.8
CC00G24230
Cyclotella cryptica
6.8e-47
190.3
160
56.9
WBGene00003815
Caenorhabditis elegans
2.0e-43
178.7
278
36.7
ccr56040
Chondrus crispus
2.2e-42
175.3
276
33.3
YHR019C
Saccharomyces cerevisiae strain S288C
1.1e-41
172.9
528
25.4
ENSG00000134440
Homo sapiens
8.0e-40
166.8
529
26.5
CC00G207840
Cyclotella cryptica
5.7e-38
160.6
116
62.1
gsu109170
Galdieria sulphuraria
5.7e-38
160.6
273
32.2
FBgn0086443
Drosophila melanogaster
9.8e-38
159.8
272
34.2
CM13G00980
Cyanidioschyzon merolae
2.8e-37
158.3
277
32.9
SPBC1773.10c
Schizosaccharomyces pombe
1.3e-34
149.4
300
31.0
WBGene00013447
Caenorhabditis elegans
1.7e-34
149.1
259
34.7
AT4G31180
Arabidopsis thaliana
1.2e-27
126.3
279
31.2
fso01010
Fistulifera solaris
4.6e-27
124.4
286
28.0
fso188120
Fistulifera solaris
1.0e-26
123.2
288
27.8
ptri107760
Phaeodactylum tricornutum
1.0e-26
123.2
287
30.0
tps60240
Thalassiosira pseudonana
1.0e-26
123.2
283
30.4
CC00G36660
Cyclotella cryptica
1.3e-26
122.9
282
29.4
AT4G26870
Arabidopsis thaliana
3.0e-26
121.7
362
27.6
Sro1100_g241300
Seminavis robusta
8.6e-26
120.2
285
28.1
tho78980
Thalassiosira oceanica
1.1e-25
119.8
283
30.0
Ec-19_005440
Ectocarpus siliculosus
1.5e-25
119.4
276
29.3
Pp3c21_10900
Physcomitrella patens
1.9e-25
119.0
275
29.5
gsu109190
Galdieria sulphuraria
2.5e-25
118.6
235
29.8
ps00G153620
Pseudo-nitzschia multiseries
1.6e-24
115.9
281
28.1
YLL018C
Saccharomyces cerevisiae strain S288C
4.7e-24
114.4
359
27.6
CM10G02200
Cyanidioschyzon merolae
6.2e-24
114.0
271
29.5
gene15008
Fragilariopsis cylindrus
1.4e-23
112.8
282
28.7
AT1G68420
Arabidopsis thaliana
1.8e-23
112.5
77
67.5
PSNMU-V1.4_AUG-EV-PASAV3_0037510
Pseudo-nitzschia multistriata
1.8e-23
112.5
314
26.8
sya00G51230
Synedra acus
1.8e-23
112.5
279
26.5
sya00G200610
Synedra acus
1.8e-23
112.5
279
26.5
Cre06.g279150
Chlamydomonas reinhardtii
4.0e-23
111.3
272
29.8
Naga_100047g38
Nannochloropsis gaditana
5.2e-23
110.9
286
27.6
Naga_100431g3
Nannochloropsis gaditana
5.2e-23
110.9
281
29.5
ptri13530
Phaeodactylum tricornutum
1.2e-22
109.8
279
28.3
pte493770
Paramecium tetraurelia
3.4e-22
108.2
288
28.1
pte36220
Paramecium tetraurelia
9.8e-22
106.7
288
27.8
ccr22700
Chondrus crispus
1.3e-21
106.3
282
25.2
ENSG00000115866
Homo sapiens
2.2e-21
105.5
274
27.0
Ec-06_003810
Ectocarpus siliculosus
2.9e-21
105.1
290
28.3
fso174020
Fistulifera solaris
4.9e-21
104.4
286
27.6
fso141070
Fistulifera solaris
1.1e-20
103.2
286
27.6
CC00G157620
Cyclotella cryptica
1.4e-20
102.8
278
28.4
tps185020
Thalassiosira pseudonana
1.4e-20
102.8
278
28.1
ps00G174750
Pseudo-nitzschia multiseries
5.4e-20
100.9
286
28.3
sya00G104700
Synedra acus
5.4e-20
100.9
284
28.5
gsu78900
Galdieria sulphuraria
7.0e-20
100.5
262
24.8
gene528
Fragilariopsis cylindrus
1.2e-19
99.8
278
27.7
SPCC1223.07c
Schizosaccharomyces pombe
1.6e-19
99.4
297
24.9
AT5G38750
Arabidopsis thaliana
7.8e-19
97.1
162
42.0
WBGene00001094
Caenorhabditis elegans
3.0e-18
95.1
294
27.2
FBgn0002069
Drosophila melanogaster
6.6e-18
94.0
275
26.5
AA0002G00520
Aureococcus anophagefferens
1.4e-15
86.3
265
26.8
emh642420
Emiliania huxleyi
6.8e-15
84.0
323
24.5
AA0023G00600
Aureococcus anophagefferens
5.8e-14
80.9
280
26.1
Sro443_g143980
Seminavis robusta
4.6e-11
71.2
250
23.6
tho115480
Thalassiosira oceanica
1.8e-07
59.3
93
31.2
Pp3c4_19930
Physcomitrella patens
8.9e-07
57.0
62
43.5
gsu29170
Galdieria sulphuraria
2.6e-06
55.5
93
34.4
gsu29190
Galdieria sulphuraria
2.6e-06
55.5
93
34.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (6 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (4 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (8 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (6 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (4 genes)
Synedra acus (5 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing