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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G62970
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G62970
Arabidopsis thaliana
6.0e-153
541.6
288
100.0
AT5G18650
Arabidopsis thaliana
4.0e-80
299.7
262
61.8
AT5G22920
Arabidopsis thaliana
6.8e-72
272.3
257
58.4
Pp3c2_31820
Physcomitrella patens
2.0e-71
270.8
253
60.1
Pp3c1_6070
Physcomitrella patens
6.4e-70
265.8
277
56.3
Pp3c11_6970
Physcomitrella patens
1.1e-69
265.0
253
59.3
Pp3c14_5600
Physcomitrella patens
3.0e-67
256.9
252
56.0
Pp3c10_4820
Physcomitrella patens
1.5e-66
254.6
252
56.0
Cre17.g718300
Chlamydomonas reinhardtii
6.8e-64
245.7
273
53.8
AT5G25560
Arabidopsis thaliana
1.2e-55
218.4
234
53.8
ENSG00000163743
Homo sapiens
3.4e-47
190.3
243
40.3
FBgn0031816
Drosophila melanogaster
5.8e-47
189.5
261
37.2
AT3G18290
Arabidopsis thaliana
1.1e-45
185.3
287
36.6
AT1G18910
Arabidopsis thaliana
1.9e-45
184.5
272
39.0
Pp3c25_14501
Physcomitrella patens
1.9e-45
184.5
257
47.5
Pp3c25_14500
Physcomitrella patens
1.9e-45
184.5
257
47.5
Pp3c6_1960
Physcomitrella patens
4.2e-45
183.3
248
48.0
AT1G74770
Arabidopsis thaliana
7.8e-44
179.1
255
34.9
ccr161060
Chondrus crispus
1.7e-43
177.9
284
35.9
Cre05.g248550
Chlamydomonas reinhardtii
1.5e-42
174.9
244
41.8
gsu76240
Galdieria sulphuraria
1.6e-41
171.4
256
38.7
Naga_100090g9
Nannochloropsis gaditana
1.6e-41
171.4
251
38.2
SPAC2F3.16
Schizosaccharomyces pombe
2.8e-41
170.6
243
38.7
CM13G01410
Cyanidioschyzon merolae
3.6e-41
170.2
245
40.4
ps00G05920
Pseudo-nitzschia multiseries
8.1e-41
169.1
257
43.2
ccr65580
Chondrus crispus
4.4e-39
163.3
246
33.7
ccr36960
Chondrus crispus
5.8e-39
162.9
252
40.1
CC00G86210
Cyclotella cryptica
1.7e-38
161.4
249
33.7
Ec-26_004520
Ectocarpus siliculosus
2.2e-38
161.0
266
36.1
Sro968_g226070
Seminavis robusta
2.2e-38
161.0
243
33.3
fso155640
Fistulifera solaris
8.4e-38
159.1
283
32.2
ptri130290
Phaeodactylum tricornutum
2.4e-37
157.5
243
33.3
Sro99_g050950
Seminavis robusta
5.4e-37
156.4
243
32.9
ps00G33510
Pseudo-nitzschia multiseries
2.1e-36
154.5
246
32.5
sya00G162130
Synedra acus
2.1e-36
154.5
260
33.1
gene16313
Fragilariopsis cylindrus
6.0e-36
152.9
243
33.3
tho217020
Thalassiosira oceanica
1.3e-35
151.8
273
35.2
ptri72160
Phaeodactylum tricornutum
2.3e-35
151.0
269
36.8
sya00G161050
Synedra acus
2.3e-35
151.0
243
33.3
fso77080
Fistulifera solaris
3.9e-35
150.2
243
32.9
pte243060
Paramecium tetraurelia
3.9e-35
150.2
255
41.2
sya00G196410
Synedra acus
6.6e-35
149.4
271
35.8
fso160310
Fistulifera solaris
8.7e-35
149.1
243
35.0
fso77050
Fistulifera solaris
2.5e-34
147.5
245
35.1
fso191720
Fistulifera solaris
2.5e-34
147.5
245
35.1
tps130000
Thalassiosira pseudonana
5.6e-34
146.4
246
33.3
Sro70_g039030
Seminavis robusta
1.3e-33
145.2
269
35.3
tps142420
Thalassiosira pseudonana
2.1e-33
144.4
247
36.8
ps00G65070
Pseudo-nitzschia multiseries
4.0e-32
140.2
278
34.9
fso199510
Fistulifera solaris
6.9e-32
139.4
279
34.1
tps193950
Thalassiosira pseudonana
6.9e-32
139.4
244
35.7
fso73640
Fistulifera solaris
1.5e-31
138.3
277
34.7
gene18213
Fragilariopsis cylindrus
4.5e-31
136.7
272
34.6
fso43770
Fistulifera solaris
1.7e-30
134.8
273
35.2
fso64760
Fistulifera solaris
1.7e-30
134.8
273
35.2
tps146910
Thalassiosira pseudonana
1.1e-29
132.1
208
32.2
CC00G149660
Cyclotella cryptica
1.4e-29
131.7
298
30.9
ptri69840
Phaeodactylum tricornutum
1.4e-29
131.7
326
31.3
tho87860
Thalassiosira oceanica
1.9e-29
131.3
212
40.1
pte760660
Paramecium tetraurelia
2.4e-29
131.0
249
40.6
gene11141
Fragilariopsis cylindrus
1.8e-27
124.8
196
44.9
Sro695_g188680
Seminavis robusta
3.0e-27
124.0
248
34.3
pte443830
Paramecium tetraurelia
3.3e-26
120.6
246
39.8
CC00G122160
Cyclotella cryptica
1.5e-23
111.7
210
35.2
fso150310
Fistulifera solaris
1.5e-23
111.7
195
32.3
CC00G69060
Cyclotella cryptica
8.4e-14
79.3
147
29.9
ccr27680
Chondrus crispus
5.7e-10
66.6
158
27.2
ccr143140
Chondrus crispus
8.2e-09
62.8
188
32.4
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
6.5e-06
53.1
87
34.5
Sro345_g122370
Seminavis robusta
6.5e-06
53.1
90
32.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (5 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (5 genes)
Synedra acus (3 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing