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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
AT3G61620
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
AT3G61620
Arabidopsis thaliana
1.2e-130
467.2
242
100.0
Pp3s48_50
Physcomitrella patens
5.0e-84
312.4
239
68.6
Cre06.g284500
Chlamydomonas reinhardtii
3.2e-75
283.1
240
59.2
Ec-03_000910
Ectocarpus siliculosus
4.5e-53
209.5
235
44.7
gsu81330
Galdieria sulphuraria
2.3e-52
207.2
217
46.5
ccr106060
Chondrus crispus
7.8e-45
182.2
222
45.0
FBgn0032487
Drosophila melanogaster
7.8e-45
182.2
232
41.4
Naga_100225g3
Nannochloropsis gaditana
6.2e-42
172.6
241
38.2
ENSG00000178896
Homo sapiens
5.2e-41
169.5
229
40.6
WBGene00007201
Caenorhabditis elegans
5.8e-40
166.0
234
38.5
SPAC3G9.10c
Schizosaccharomyces pombe
5.4e-38
159.5
233
40.8
YGR195W
Saccharomyces cerevisiae strain S288C
2.8e-34
147.1
244
36.5
Sro2148_g316530
Seminavis robusta
4.4e-32
139.8
236
39.4
ptri36390
Phaeodactylum tricornutum
7.5e-32
139.0
241
39.4
sya00G161450
Synedra acus
3.5e-29
130.2
236
38.6
fso28300
Fistulifera solaris
7.8e-29
129.0
225
35.1
fso97220
Fistulifera solaris
7.8e-29
129.0
225
35.1
Ec-14_005640
Ectocarpus siliculosus
2.3e-28
127.5
228
33.8
Pp3c3_18310
Physcomitrella patens
1.2e-26
121.7
224
31.2
PSNMU-V1.4_AUG-EV-PASAV3_0001340
Pseudo-nitzschia multistriata
1.6e-26
121.3
243
36.2
gene2565
Fragilariopsis cylindrus
8.9e-25
115.5
248
32.7
emh604040
Emiliania huxleyi
4.4e-24
113.2
239
29.3
CC00G184990
Cyclotella cryptica
3.2e-22
107.1
261
33.0
pte761740
Paramecium tetraurelia
1.0e-20
102.1
230
29.6
AT4G27490
Arabidopsis thaliana
5.1e-20
99.8
222
29.7
ccr62880
Chondrus crispus
8.7e-20
99.0
139
39.6
ccr85640
Chondrus crispus
8.7e-20
99.0
139
39.6
ccr64680
Chondrus crispus
1.1e-19
98.6
135
39.3
ps00G136670
Pseudo-nitzschia multiseries
4.3e-19
96.7
156
41.0
ptri11680
Phaeodactylum tricornutum
1.2e-18
95.1
180
37.2
ccr08020
Chondrus crispus
2.1e-18
94.4
233
32.2
Ec-01_002040
Ectocarpus siliculosus
6.2e-18
92.8
223
29.6
ptri137330
Phaeodactylum tricornutum
6.2e-18
92.8
253
29.2
gsu126270
Galdieria sulphuraria
2.4e-17
90.9
171
37.4
tps150110
Thalassiosira pseudonana
9.0e-17
89.0
166
38.6
ENSG00000223496
Homo sapiens
1.2e-16
88.6
237
28.3
emh209160
Emiliania huxleyi
2.0e-16
87.8
178
32.0
AT3G46210
Arabidopsis thaliana
3.4e-16
87.0
192
30.7
Cre14.g624500
Chlamydomonas reinhardtii
7.6e-16
85.9
175
35.4
tho39520
Thalassiosira oceanica
9.9e-16
85.5
128
39.8
Pp3c4_10290
Physcomitrella patens
3.8e-15
83.6
149
34.2
fso22700
Fistulifera solaris
6.4e-15
82.8
247
27.9
fso176630
Fistulifera solaris
8.4e-15
82.4
165
33.9
ccr09440
Chondrus crispus
4.2e-14
80.1
111
39.6
Naga_100854g1
Nannochloropsis gaditana
7.1e-14
79.3
253
26.5
fso111980
Fistulifera solaris
9.3e-14
79.0
176
32.4
ENSG00000077348
Homo sapiens
9.3e-14
79.0
214
29.0
Naga_100349g4
Nannochloropsis gaditana
1.6e-13
78.2
170
30.0
emh360120
Emiliania huxleyi
4.6e-13
76.6
222
25.7
emh548650
Emiliania huxleyi
1.3e-12
75.1
222
25.2
SPBC211.08c
Schizosaccharomyces pombe
1.7e-12
74.7
189
31.2
sya00G71620
Synedra acus
2.3e-12
74.3
184
29.9
Sro277_g106210
Seminavis robusta
6.6e-12
72.8
247
25.1
ps00G06060
Pseudo-nitzschia multiseries
8.7e-12
72.4
147
29.3
Sro6_g005010
Seminavis robusta
8.7e-12
72.4
144
29.9
ccr98800
Chondrus crispus
1.5e-11
71.6
175
29.1
Sro492_g153820
Seminavis robusta
1.9e-11
71.2
147
28.6
Cre17.g697624
Chlamydomonas reinhardtii
2.5e-11
70.9
188
27.7
Sro3366_g347270
Seminavis robusta
3.3e-11
70.5
247
24.7
PSNMU-V1.4_AUG-EV-PASAV3_0090710
Pseudo-nitzschia multistriata
4.3e-11
70.1
147
29.3
FBgn0036916
Drosophila melanogaster
1.3e-10
68.6
139
33.8
Pp3c2_19900
Physcomitrella patens
1.3e-10
68.6
208
27.4
PSNMU-V1.4_AUG-EV-PASAV3_0060890
Pseudo-nitzschia multistriata
1.6e-10
68.2
272
25.7
gsu132420
Galdieria sulphuraria
4.8e-10
66.6
229
26.2
CC00G05470
Cyclotella cryptica
6.2e-10
66.2
177
28.2
sya00G22410
Synedra acus
6.2e-10
66.2
154
32.5
tho08460
Thalassiosira oceanica
6.2e-10
66.2
180
27.2
tps152750
Thalassiosira pseudonana
8.1e-10
65.9
138
30.4
AT5G14580
Arabidopsis thaliana
1.4e-09
65.1
206
27.7
CM15G02060
Cyanidioschyzon merolae
5.3e-09
63.2
264
25.4
Pp3c1_22150
Physcomitrella patens
5.3e-09
63.2
238
26.1
sya00G45360
Synedra acus
6.9e-09
62.8
244
24.6
WBGene00000202
Caenorhabditis elegans
1.2e-08
62.0
217
23.5
tho42660
Thalassiosira oceanica
1.2e-08
62.0
276
22.5
tps130260
Thalassiosira pseudonana
1.2e-08
62.0
244
25.0
CM10G03090
Cyanidioschyzon merolae
1.5e-08
61.6
83
43.4
tps218110
Thalassiosira pseudonana
1.5e-08
61.6
116
34.5
WBGene00015266
Caenorhabditis elegans
4.5e-08
60.1
212
25.9
CM20G01140
Cyanidioschyzon merolae
4.5e-08
60.1
196
26.0
CC00G119790
Cyclotella cryptica
4.5e-08
60.1
246
25.2
CC00G100120
Cyclotella cryptica
7.6e-08
59.3
111
34.2
FBgn0037815
Drosophila melanogaster
9.9e-08
58.9
136
28.7
SPBC115.01c
Schizosaccharomyces pombe
9.9e-08
58.9
212
24.1
AT3G03710
Arabidopsis thaliana
1.3e-07
58.5
230
24.3
ccr183720
Chondrus crispus
1.3e-07
58.5
268
25.7
WBGene00000798
Caenorhabditis elegans
3.8e-07
57.0
214
23.4
gene16889
Fragilariopsis cylindrus
6.4e-07
56.2
244
25.4
gsu31610
Galdieria sulphuraria
1.1e-06
55.5
158
30.4
PSNMU-V1.4_AUG-EV-PASAV3_0082120
Pseudo-nitzschia multistriata
1.1e-06
55.5
244
24.2
ptri130250
Phaeodactylum tricornutum
1.1e-06
55.5
246
24.4
FBgn0039846
Drosophila melanogaster
1.4e-06
55.1
263
24.7
Sro829_g208050
Seminavis robusta
1.4e-06
55.1
242
24.4
Ec-16_001470
Ectocarpus siliculosus
1.9e-06
54.7
248
23.0
gene11577
Fragilariopsis cylindrus
1.9e-06
54.7
130
29.2
ps00G175850
Pseudo-nitzschia multiseries
1.9e-06
54.7
288
23.6
AA0021G00080
Aureococcus anophagefferens
4.2e-06
53.5
214
25.7
YGR095C
Saccharomyces cerevisiae strain S288C
7.1e-06
52.8
227
23.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (8 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (6 genes)
Synedra acus (4 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing