Gene: AT5G14580 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G14580
Transcript Identifier
AT5G14580.1
Gene Type
Coding gene
Location
5 : 4697612-4703013 : negative

Family Information

Homologous gene family
HOM02SEM001003
(49 genes in 23 species)
specific family
Orthologous gene family
ORTHO02SEM001109
(46 genes in 23 species)
specific family

Descriptions

Description
polyribonucleotide nucleotidyltransferase, putative
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Identifiers

Type Value
uniprotQ9S7G6

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0006402
IEA
InterPromRNA catabolic process
GO:0000963
IMP
Gene Ontologymitochondrial RNA processing1 2
GO:0000957
IMP
Gene Ontologymitochondrial RNA catabolic process1 2
GO:0071345
IEA
PLAZA Integrative Orthologycellular response to cytokine stimulus ENSG00000138035
GO:0034599
IEA
PLAZA Integrative Orthologycellular response to oxidative stress ENSG00000138035
GO:0031124
IEA
PLAZA Integrative OrthologymRNA 3'-end processing ENSG00000138035
GO:0031123
IEA
PLAZA Integrative OrthologyRNA 3'-end processing ENSG00000138035
GO:2000627
IEA
PLAZA Integrative Orthologypositive regulation of miRNA catabolic process ENSG00000138035
GO:2000625
IEA
PLAZA Integrative Orthologyregulation of miRNA catabolic process ENSG00000138035
GO:0010604
IEA
PLAZA Integrative Orthologypositive regulation of macromolecule metabolic process ENSG00000138035
GO:0051234
IEA
PLAZA Integrative Orthologyestablishment of localization ENSG00000138035
GO:0051236
IEA
PLAZA Integrative Orthologyestablishment of RNA localization ENSG00000138035
GO:0010608
IEA
PLAZA Integrative Orthologyposttranscriptional regulation of gene expression FBgn0039846
GO:2000628
IEA
PLAZA Integrative Orthologyregulation of miRNA metabolic process ENSG00000138035
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process ENSG00000138035
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle ENSG00000138035
GO:0007569
IEA
PLAZA Integrative Orthologycell aging ENSG00000138035
GO:0007568
IEA
PLAZA Integrative Orthologyaging ENSG00000138035
GO:0035458
IEA
PLAZA Integrative Orthologycellular response to interferon-beta ENSG00000138035
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus ENSG00000138035
GO:0035456
IEA
PLAZA Integrative Orthologyresponse to interferon-beta ENSG00000138035
GO:0050657
IEA
PLAZA Integrative Orthologynucleic acid transport ENSG00000138035
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process ENSG00000138035
GO:0033036
IEA
PLAZA Integrative Orthologymacromolecule localization ENSG00000138035
GO:0050658
IEA
PLAZA Integrative OrthologyRNA transport ENSG00000138035
GO:0033554
IEA
PLAZA Integrative Orthologycellular response to stress ENSG00000138035
GO:0006979
IEA
PLAZA Integrative Orthologyresponse to oxidative stress ENSG00000138035
GO:0048583
IEA
PLAZA Integrative Orthologyregulation of response to stimulus ENSG00000138035
GO:0034097
IEA
PLAZA Integrative Orthologyresponse to cytokine ENSG00000138035
GO:0010586
IEA
PLAZA Integrative OrthologymiRNA metabolic process ENSG00000138035
GO:0010587
IEA
PLAZA Integrative OrthologymiRNA catabolic process ENSG00000138035
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis ENSG00000138035
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization ENSG00000138035
GO:0071047
IEA
PLAZA Integrative Orthologypolyadenylation-dependent mRNA catabolic process ENSG00000138035
GO:0051179
IEA
PLAZA Integrative Orthologylocalization ENSG00000138035
GO:0071042
IEA
PLAZA Integrative Orthologynuclear polyadenylation-dependent mRNA catabolic process ENSG00000138035
GO:0007346
IEA
PLAZA Integrative Orthologyregulation of mitotic cell cycle ENSG00000138035
GO:0006378
IEA
PLAZA Integrative OrthologymRNA polyadenylation ENSG00000138035
GO:0006810
IEA
PLAZA Integrative Orthologytransport ENSG00000138035
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical ENSG00000138035
GO:0034660
IEA
PLAZA Integrative OrthologyncRNA metabolic process ENSG00000138035
GO:0034661
IEA
PLAZA Integrative OrthologyncRNA catabolic process ENSG00000138035
GO:0044528
IEA
PLAZA Integrative Orthologyregulation of mitochondrial mRNA stability FBgn0039846
GO:0070887
IEA
PLAZA Integrative Orthologycellular response to chemical stimulus ENSG00000138035
GO:0051726
IEA
PLAZA Integrative Orthologyregulation of cell cycle ENSG00000138035
GO:0071850
IEA
PLAZA Integrative Orthologymitotic cell cycle arrest ENSG00000138035
GO:0044085
IEA
PLAZA Integrative Orthologycellular component biogenesis ENSG00000138035
GO:0006403
IEA
PLAZA Integrative OrthologyRNA localization ENSG00000138035
GO:0051171
IEA
PLAZA Integrative Orthologyregulation of nitrogen compound metabolic process ENSG00000138035
GO:0051173
IEA
PLAZA Integrative Orthologypositive regulation of nitrogen compound metabolic process ENSG00000138035
GO:0022607
IEA
PLAZA Integrative Orthologycellular component assembly ENSG00000138035
GO:0061014
IEA
PLAZA Integrative Orthologypositive regulation of mRNA catabolic process ENSG00000138035
GO:0061013
IEA
PLAZA Integrative Orthologyregulation of mRNA catabolic process ENSG00000138035
GO:0007050
IEA
PLAZA Integrative Orthologycell cycle arrest ENSG00000138035
GO:0071702
IEA
PLAZA Integrative Orthologyorganic substance transport ENSG00000138035
GO:0015931
IEA
PLAZA Integrative Orthologynucleobase-containing compound transport ENSG00000138035
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process ENSG00000138035
GO:0080090
IEA
PLAZA Integrative Orthologyregulation of primary metabolic process ENSG00000138035
GO:0031325
IEA
PLAZA Integrative Orthologypositive regulation of cellular metabolic process ENSG00000138035
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus ENSG00000138035
GO:0035928
IEA
PLAZA Integrative OrthologyrRNA import into mitochondrion ENSG00000138035
GO:0035927
IEA
PLAZA Integrative OrthologyRNA import into mitochondrion ENSG00000138035
GO:0031329
IEA
PLAZA Integrative Orthologyregulation of cellular catabolic process ENSG00000138035
GO:0000960
IEA
PLAZA Integrative Orthologyregulation of mitochondrial RNA catabolic process ENSG00000138035
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress ENSG00000138035
GO:0000962
IEA
PLAZA Integrative Orthologypositive regulation of mitochondrial RNA catabolic process ENSG00000138035
GO:0006397
IEA
PLAZA Integrative OrthologymRNA processing ENSG00000138035
GO:0000964
IEA
PLAZA Integrative Orthologymitochondrial RNA 5'-end processing ENSG00000138035
GO:1903313
IEA
PLAZA Integrative Orthologypositive regulation of mRNA metabolic process ENSG00000138035
GO:0000965
IEA
PLAZA Integrative Orthologymitochondrial RNA 3'-end processing ENSG00000138035
GO:0000966
IEA
PLAZA Integrative OrthologyRNA 5'-end processing ENSG00000138035
GO:1903311
IEA
PLAZA Integrative Orthologyregulation of mRNA metabolic process ENSG00000138035
GO:0055085
IEA
PLAZA Integrative Orthologytransmembrane transport ENSG00000138035
GO:0071705
IEA
PLAZA Integrative Orthologynitrogen compound transport ENSG00000138035
GO:0043933
IEA
PLAZA Integrative Orthologyprotein-containing complex subunit organization ENSG00000138035
GO:0051029
IEA
PLAZA Integrative OrthologyrRNA transport ENSG00000138035
GO:2000772
IEA
PLAZA Integrative Orthologyregulation of cellular senescence ENSG00000138035
GO:0031331
IEA
PLAZA Integrative Orthologypositive regulation of cellular catabolic process ENSG00000138035
GO:0071310
IEA
PLAZA Integrative Orthologycellular response to organic substance ENSG00000138035
GO:0097222
IEA
PLAZA Integrative Orthologymitochondrial mRNA polyadenylation ENSG00000138035
GO:1990542
IEA
PLAZA Integrative Orthologymitochondrial transmembrane transport ENSG00000138035
GO:0000278
IEA
PLAZA Integrative Orthologymitotic cell cycle ENSG00000138035
GO:0043487
IEA
PLAZA Integrative Orthologyregulation of RNA stability FBgn0039846
GO:0009894
IEA
PLAZA Integrative Orthologyregulation of catabolic process ENSG00000138035
GO:0043488
IEA
PLAZA Integrative Orthologyregulation of mRNA stability FBgn0039846
GO:0009896
IEA
PLAZA Integrative Orthologypositive regulation of catabolic process ENSG00000138035
GO:0045786
IEA
PLAZA Integrative Orthologynegative regulation of cell cycle ENSG00000138035
GO:0090398
IEA
PLAZA Integrative Orthologycellular senescence ENSG00000138035
GO:0000958
IEA
PLAZA Integrative Orthologymitochondrial mRNA catabolic process ENSG00000138035
GO:0009893
IEA
PLAZA Integrative Orthologypositive regulation of metabolic process ENSG00000138035
GO:0019219
IEA
PLAZA Integrative Orthologyregulation of nucleobase-containing compound metabolic process ENSG00000138035
GO:0051259
IEA
PLAZA Integrative Orthologyprotein complex oligomerization ENSG00000138035
GO:0051252
IEA
PLAZA Integrative Orthologyregulation of RNA metabolic process ENSG00000138035
GO:0051254
IEA
PLAZA Integrative Orthologypositive regulation of RNA metabolic process ENSG00000138035
GO:0040007
IEA
PLAZA Integrative Orthologygrowth ENSG00000138035
GO:0043632
IEA
PLAZA Integrative Orthologymodification-dependent macromolecule catabolic process ENSG00000138035
GO:0040008
IEA
PLAZA Integrative Orthologyregulation of growth ENSG00000138035
GO:0043633
IEA
PLAZA Integrative Orthologypolyadenylation-dependent RNA catabolic process ENSG00000138035
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process ENSG00000138035
GO:0043631
IEA
PLAZA Integrative OrthologyRNA polyadenylation ENSG00000138035
GO:0045930
IEA
PLAZA Integrative Orthologynegative regulation of mitotic cell cycle ENSG00000138035
GO:0051260
IEA
PLAZA Integrative Orthologyprotein homooligomerization ENSG00000138035
GO:0090342
IEA
PLAZA Integrative Orthologyregulation of cell aging ENSG00000138035
GO:0065003
IEA
PLAZA Integrative Orthologyprotein-containing complex assembly ENSG00000138035
GO:0010033
IEA
PLAZA Integrative Orthologyresponse to organic substance ENSG00000138035
GO:0045935
IEA
PLAZA Integrative Orthologypositive regulation of nucleobase-containing compound metabolic process ENSG00000138035
GO:0065008
IEA
PLAZA Integrative Orthologyregulation of biological quality FBgn0039846
GO:2000630
IEA
PLAZA Integrative Orthologypositive regulation of miRNA metabolic process ENSG00000138035
GO:0070206
IEA
PLAZA Integrative Orthologyprotein trimerization ENSG00000138035
GO:0090615
IEA
PLAZA Integrative Orthologymitochondrial mRNA processing ENSG00000138035
GO:0070207
IEA
PLAZA Integrative Orthologyprotein homotrimerization ENSG00000138035
GO:0090616
IEA
PLAZA Integrative Orthologymitochondrial mRNA 3'-end processing ENSG00000138035
GO:0048522
IEA
PLAZA Integrative Orthologypositive regulation of cellular process ENSG00000138035
GO:0006839
IEA
PLAZA Integrative Orthologymitochondrial transport ENSG00000138035
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process ENSG00000138035
GO:0050793
IEA
PLAZA Integrative Orthologyregulation of developmental process ENSG00000138035
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process ENSG00000138035
GO:0080135
IEA
PLAZA Integrative Orthologyregulation of cellular response to stress ENSG00000138035
GO:0080134
IEA
PLAZA Integrative Orthologyregulation of response to stress ENSG00000138035
GO:0022402
IEA
PLAZA Integrative Orthologycell cycle process ENSG00000138035
GO:0045926
IEA
PLAZA Integrative Orthologynegative regulation of growth ENSG00000138035

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
ISS
Gene OntologyRNA binding3
GO:0003723
IEA
InterProRNA binding
GO:0000175
IMP
ISS
Gene Ontology3'-5'-exoribonuclease activity1 2 3
GO:0000175
IEA
InterPro3'-5'-exoribonuclease activity
GO:0004654
IMP
Gene Ontologypolyribonucleotide nucleotidyltransferase activity1 2
GO:0004654
IEA
InterPropolyribonucleotide nucleotidyltransferase activity
GO:0003676
ISS
Gene Ontologynucleic acid binding3
GO:0003676
IEA
InterPronucleic acid binding
GO:0035198
IEA
PLAZA Integrative OrthologymiRNA binding ENSG00000138035
GO:0008266
IEA
PLAZA Integrative Orthologypoly(U) RNA binding ENSG00000138035
GO:0034046
IEA
PLAZA Integrative Orthologypoly(G) binding ENSG00000138035
GO:0061980
IEA
PLAZA Integrative Orthologyregulatory RNA binding ENSG00000138035
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding ENSG00000138035
GO:0070717
IEA
PLAZA Integrative Orthologypoly-purine tract binding ENSG00000138035
GO:0003727
IEA
PLAZA Integrative Orthologysingle-stranded RNA binding ENSG00000138035
GO:0008187
IEA
PLAZA Integrative Orthologypoly-pyrimidine tract binding ENSG00000138035

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast4
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen ENSG00000138035
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part ENSG00000138035
GO:0044429
IEA
PLAZA Integrative Orthologymitochondrial part ENSG00000138035
GO:1902494
IEA
PLAZA Integrative Orthologycatalytic complex ENSG00000138035
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex ENSG00000138035
GO:1905354
IEA
PLAZA Integrative Orthologyexoribonuclease complex ENSG00000138035
GO:0005829
IEA
PLAZA Integrative Orthologycytosol ENSG00000138035
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion ENSG00000138035
GO:0031967
IEA
PLAZA Integrative Orthologyorganelle envelope ENSG00000138035
GO:0000177
IEA
PLAZA Integrative Orthologycytoplasmic exosome (RNase complex) ENSG00000138035
GO:0005740
IEA
PLAZA Integrative Orthologymitochondrial envelope ENSG00000138035
GO:0031975
IEA
PLAZA Integrative Orthologyenvelope ENSG00000138035
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen ENSG00000138035
GO:0031970
IEA
PLAZA Integrative Orthologyorganelle envelope lumen ENSG00000138035
GO:0098798
IEA
PLAZA Integrative Orthologymitochondrial protein complex ENSG00000138035
GO:0045025
IEA
PLAZA Integrative Orthologymitochondrial degradosome ENSG00000138035
GO:0005758
IEA
PLAZA Integrative Orthologymitochondrial intermembrane space ENSG00000138035
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part ENSG00000138035
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen ENSG00000138035
GO:0000178
IEA
PLAZA Integrative Orthologyexosome (RNase complex) ENSG00000138035

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR027408PNPase/RNase PH domain superfamily
IPR004088K Homology domain, type 1
IPR015848Polyribonucleotide nucleotidyltransferase, RNA-binding domain
IPR012162Polyribonucleotide nucleotidyltransferase
IPR001247Exoribonuclease, phosphorolytic domain 1
IPR003029S1 domain
IPR015847Exoribonuclease, phosphorolytic domain 2
IPR022967RNA-binding domain, S1
IPR020568Ribosomal protein S5 domain 2-type fold
IPR012340Nucleic acid-binding, OB-fold

No MapMan annotations defined for this gene.
KeggID Description
K00962pnp, PNPT1; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
No chloroplast target sequence found.