Gene: Zosma11g00320

General Information

Structural Information

  • Species Zostera marina
  • Gene Identifier Zosma11g00320
  • Transcript Identifier Zosma11g00320.1
  • Gene Type Coding gene
  • Location scaffold_11 : 1078239-1078739 : negative

Gene Family Information

  • ID HOM05M000548
  • #Genes/#Species 539/53
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Zosma11g00320.v3.1
  • pacid 50109667

Descriptions

  • Description PTHR24012//PTHR24012:SF491 - FAMILY NOT NAMED // FOUND IN NEURONS, ISOFORM A-RELATED
  • Loading (ortholog descriptions from zma)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0060211
ISO
PLAZA Integrative Orthologyregulation of nuclear-transcribed mRNA poly(A) tail shortening AT1G22760
GO:1900151
ISO
PLAZA Integrative Orthologyregulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay AT4G34110
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G49760
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT1G22760
GO:0006413
ISO
PLAZA Integrative Orthologytranslational initiation AT1G71770
GO:0006446
ISO
PLAZA Integrative Orthologyregulation of translational initiation AT4G34110
GO:0000289
ISO
PLAZA Integrative Orthologynuclear-transcribed mRNA poly(A) tail shortening AT1G71770

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05M000548
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G49760
GO:0008143
ISO
PLAZA Integrative Orthologypoly(A) binding AT1G71770
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G49760

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G71770
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G49760

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
35.1 not assigned.annotated