Gene: Solyc12g049560.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g049560.2
  • Transcript Identifier Solyc12g049560.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 60873601-60875818 : negative

Gene Family Information

  • ID HOM05M000017
  • #Genes/#Species 5441/53
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g049560.2.1
  • uniprot A0A3Q7JAJ2

Descriptions

  • Description Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2ZB67_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071456
ISO
PLAZA Integrative Orthologycellular response to hypoxia AT1G72360
GO:0034059
ISO
PLAZA Integrative Orthologyresponse to anoxia AT1G72360
GO:0010104
ISO
PLAZA Integrative Orthologyregulation of ethylene-activated signaling pathway Solyc03g123500.4
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT3G14230
GO:0071369
ISO
PLAZA Integrative Orthologycellular response to ethylene stimulus AT1G72360
GO:0070483
ISO
PLAZA Integrative Orthologydetection of hypoxia AT1G53910
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT1G72360
GO:0071454
ISO
PLAZA Integrative Orthologycellular response to anoxia AT1G72360
GO:0001666
ISO
PLAZA Integrative Orthologyresponse to hypoxia AT1G72360
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc06g063070.3
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin Solyc03g123500.4
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene AT1G72360
GO:2000280
ISO
PLAZA Integrative Orthologyregulation of root development AT1G53910
GO:0009873
IEA
GOA Databaseethylene-activated signaling pathway
GO:0009873
IEA
InterProethylene-activated signaling pathway
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006952
IEA
GOA Databasedefense response

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G72360
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G72360
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G72360
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT1G72360
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G53910
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044808 Ethylene-responsive transcription factor
IPR036955 AP2/ERF domain superfamily
IPR016177 DNA-binding domain superfamily
IPR001471 AP2/ERF domain
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)