Gene: Solyc12g040510.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g040510.2
  • Transcript Identifier Solyc12g040510.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 53673824-53675419 : positive

Gene Family Information

  • ID HOM05M002685
  • #Genes/#Species 139/52
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g040510.2.1
  • uniprot A0A3Q7J9P2

Descriptions

  • Description Guanine nucleotide-binding protein subunit beta-like protein (AHRD V3.3 *** A0A1U8FJH9_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010476
ISO
PLAZA Integrative Orthologygibberellin mediated signaling pathway AT1G18080
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus Os01g0686800
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT1G18080
GO:0071215
ISO
PLAZA Integrative Orthologycellular response to abscisic acid stimulus AT1G48630
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT1G48630
GO:0009749
ISO
PLAZA Integrative Orthologyresponse to glucose AT1G18080
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin AT1G18080
GO:0006417
ISO
PLAZA Integrative Orthologyregulation of translation AT1G48630
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G48630
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT1G48630
GO:0009967
ISO
PLAZA Integrative Orthologypositive regulation of signal transduction AT1G48630
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G18080
GO:0042254
ISO
PLAZA Integrative Orthologyribosome biogenesis AT1G48630
GO:0060267
ISO
PLAZA Integrative Orthologypositive regulation of respiratory burst Os01g0686800
GO:0072344
IBA
GOA Databaserescue of stalled ribosome
GO:0001934
IBA
GOA Databasepositive regulation of protein phosphorylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0060090
ISO
PLAZA Integrative Orthologymolecular adaptor activity AT1G18080
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G18080
GO:0003735
ISO
PLAZA Integrative Orthologystructural constituent of ribosome AT1G48630
GO:0005515
IEA
InterProprotein binding
GO:0005078
ISO
PLAZA Integrative OrthologyMAP-kinase scaffold activity AT1G48630
GO:0043022
IBA
GOA Databaseribosome binding
GO:0005080
IBA
GOA Databaseprotein kinase C binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane Os01g0686800
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G18080
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G18080
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT1G48630
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G18130
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT1G48630
GO:0005829
IBA
GOA Databasecytosol
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
17.1.3.1.33 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.associated component RACK1