Gene: Solyc11g071700.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g071700.2
  • Transcript Identifier Solyc11g071700.2.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 53166614-53187218 : positive

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g071700.2.1
  • uniprot A0A3Q7J0R2

Descriptions

  • Description ubiquitin carboxyl-terminal hydrolase 12 (AHRD V3.3 *** A0A2I4H4Q0_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009615
ISO
PLAZA Integrative Orthologyresponse to virus AT3G58350
GO:0046741
ISO
PLAZA Integrative Orthologytransport of virus in host, tissue to tissue AT3G58350
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT3G58350
GO:0016579
IBA
IEA
GOA Databaseprotein deubiquitination
GO:0016579
IEA
InterProprotein deubiquitination
GO:0031647
IBA
GOA Databaseregulation of protein stability
GO:0006511
IEA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0006508
IEA
GOA Databaseproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IBA
IEA
GOA Databasethiol-dependent deubiquitinase
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT3G58350
GO:0004197
IBA
GOA Databasecysteine-type endopeptidase activity
GO:0005515
IEA
InterProprotein binding
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005829
IBA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002083 MATH/TRAF domain
IPR008974 TRAF-like
IPR029346 Ubiquitin carboxyl-terminal hydrolase, C-terminal
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR038765 Papain-like cysteine peptidase superfamily
IPR024729 Ubiquitin carboxyl-terminal hydrolase 7, ICP0-binding domain
Mapman id Description
14.6.2.3 DNA damage response.nucleotide excision repair (NER).transcription-coupled nucleotide excision repair (TC-NER).deubiquitinase (UBP12-13)
19.2.3.1.1.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP12-13)