Gene: Solyc11g068830.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g068830.2
- Transcript Identifier Solyc11g068830.2.1
- Gene Type Coding gene
- Location SL4.0ch11 : 51497760-51502475 : positive
Gene Family Information
- ID HOM05M000265
- #Genes/#Species 924/53
- Phylogenetic origin
- ID ORTHO05M003485
- #Genes/#Species 124/52
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc11g068830.2.1
- uniprot A0A3Q7J0E0
Descriptions
- Description Uridine 5'-monophosphate synthase (AHRD V3.3 *** A0A1U8EL35_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016036 | ISO | PLAZA Integrative Orthology | cellular response to phosphate starvation | AT3G54470 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT3G54470 |
| GO:0009220 | ISO | PLAZA Integrative Orthology | pyrimidine ribonucleotide biosynthetic process | AT3G54470 |
| GO:0019856 | IBA | GOA Database | pyrimidine nucleobase biosynthetic process | |
| GO:0006222 | IBA | GOA Database | UMP biosynthetic process | |
| GO:0009116 | IEA | GOA Database | nucleoside metabolic process | |
| GO:0009116 | IEA | InterPro | nucleoside metabolic process | |
| GO:0006207 | IEA | GOA Database | 'de novo' pyrimidine nucleobase biosynthetic process | |
| GO:0006207 | IEA | InterPro | 'de novo' pyrimidine nucleobase biosynthetic process | |
| GO:0008152 | IEA | GOA Database | metabolic process | |
| GO:0006221 | IEA | GOA Database | pyrimidine nucleotide biosynthetic process | |
| GO:0044205 | IEA | GOA Database | 'de novo' UMP biosynthetic process | |
| GO:0044205 | IEA | InterPro | 'de novo' UMP biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016831 | IEA | GOA Database | carboxy-lyase activity | |
| GO:0004590 | IBA IEA | GOA Database | orotidine-5'-phosphate decarboxylase activity | |
| GO:0004590 | IEA | InterPro | orotidine-5'-phosphate decarboxylase activity | |
| GO:0004588 | IBA IEA | GOA Database | orotate phosphoribosyltransferase activity | |
| GO:0004588 | IEA | InterPro | orotate phosphoribosyltransferase activity | |
| GO:0016829 | IEA | GOA Database | lyase activity | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G54470 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029057 | Phosphoribosyltransferase-like |
| IPR000836 | Phosphoribosyltransferase domain |
| IPR014732 | Orotidine 5'-phosphate decarboxylase |
| IPR011060 | Ribulose-phosphate binding barrel |
| IPR001754 | Orotidine 5'-phosphate decarboxylase domain |
| IPR013785 | Aldolase-type TIM barrel |
| IPR004467 | Orotate phosphoribosyl transferase domain |
| Mapman id | Description |
|---|---|
| 6.2.1.5 | Nucleotide metabolism.pyrimidines.de novo biosynthesis.UMP synthase |