Gene: Solyc11g044470.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g044470.3
  • Transcript Identifier Solyc11g044470.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 31358662-31363990 : negative

Gene Family Information

  • ID HOM05M000662
  • #Genes/#Species 459/50
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g044470.3.1
  • uniprot A0A3Q7JMA4

Descriptions

  • Description RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** Q67YS0_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030154
IEA
GOA Databasecell differentiation
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT3G54770
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G54770
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT3G54770
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G54770

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G54770

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR037366 BOULE/DAZ family
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.1 not assigned.annotated