Gene: Solyc11g010590.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g010590.3
- Transcript Identifier Solyc11g010590.3.1
- Gene Type Coding gene
- Location SL4.0ch11 : 3684806-3687743 : negative
Gene Family Information
- ID HOM05M001406
- #Genes/#Species 241/53
- Specific Family
- ID ORTHO05M002397
- #Genes/#Species 161/52
- Specific Family
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc11g010590.3.1
- uniprot A0A3Q7IR89
Descriptions
- Description Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (AHRD V3.3 *** A0A2G2Y571_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0050732 | ISO | PLAZA Integrative Orthology | negative regulation of peptidyl-tyrosine phosphorylation | AT5G10480 |
| GO:0030154 | ISO | PLAZA Integrative Orthology | cell differentiation | AT5G10480 |
| GO:0048640 | ISO | PLAZA Integrative Orthology | negative regulation of developmental growth | AT5G10480 |
| GO:0051302 | ISO | PLAZA Integrative Orthology | regulation of cell division | AT5G10480 |
| GO:0030497 | IBA | GOA Database | fatty acid elongation | |
| GO:0030148 | IBA | GOA Database | sphingolipid biosynthetic process | |
| GO:0006633 | IEA | GOA Database | fatty acid biosynthetic process | |
| GO:0042761 | IBA | GOA Database | very long-chain fatty acid biosynthetic process | |
| GO:0006631 | IEA | GOA Database | fatty acid metabolic process | |
| GO:0006629 | IEA | GOA Database | lipid metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080023 | ISO | PLAZA Integrative Orthology | 3R-hydroxyacyl-CoA dehydratase activity | AT5G10480 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G10480 |
| GO:0018812 | IBA | GOA Database | 3-hydroxyacyl-CoA dehydratase activity | |
| GO:0016829 | IEA | GOA Database | lyase activity | |
| GO:0102343 | IEA | GOA Database | 3-hydroxy-arachidoyl-CoA dehydratase activity | |
| GO:0102344 | IEA | GOA Database | 3-hydroxy-behenoyl-CoA dehydratase activity | |
| GO:0102345 | IEA | GOA Database | 3-hydroxy-lignoceroyl-CoA dehydratase activity | |
| GO:0102158 | IEA | GOA Database | very-long-chain 3-hydroxyacyl-CoA dehydratase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030176 | IBA | GOA Database | integral component of endoplasmic reticulum membrane | |
| GO:0009923 | ISO | PLAZA Integrative Orthology | fatty acid elongase complex | AT5G10480 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G10480 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G10480 |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007482 | Protein-tyrosine phosphatase-like, PTPLA |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |