Gene: Solyc07g005560.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g005560.3
  • Transcript Identifier Solyc07g005560.3.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 433084-436573 : positive

Gene Family Information

  • ID HOM05M001224
  • #Genes/#Species 272/53
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g005560.3.1
  • uniprot Q9AXQ5

Descriptions

  • Description Eukaryotic translation initiation factor 5A (AHRD V3.3 *** A0A2G3BXD8_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0012501
ISO
PLAZA Integrative Orthologyprogrammed cell death AT1G26630
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G26630
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G26630
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT1G26630
GO:0034050
ISO
PLAZA Integrative Orthologyprogrammed cell death induced by symbiont AT1G26630
GO:0009617
ISO
PLAZA Integrative Orthologyresponse to bacterium AT1G26630
GO:0045901
IBA
IEA
GOA Databasepositive regulation of translational elongation
GO:0045901
IEA
InterPropositive regulation of translational elongation
GO:0045905
IEA
GOA Databasepositive regulation of translational termination
GO:0045905
IEA
InterPropositive regulation of translational termination
GO:0006413
IEA
GOA Databasetranslational initiation
GO:0006412
IEA
GOA Databasetranslation
GO:0006414
IEA
GOA Databasetranslational elongation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G26630
GO:0003746
IBA
IEA
GOA Databasetranslation elongation factor activity
GO:0003746
IEA
InterProtranslation elongation factor activity
GO:0043022
IEA
GOA Databaseribosome binding
GO:0043022
IEA
InterProribosome binding
GO:0003743
IEA
GOA Databasetranslation initiation factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G26630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014722 Ribosomal protein L2, domain 2
IPR012340 Nucleic acid-binding, OB-fold
IPR001884 Translation elongation factor IF5A-like
IPR008991 Translation protein SH3-like domain superfamily
IPR020189 Translation elongation factor, IF5A C-terminal
Mapman id Description
17.5.3.1 Protein biosynthesis.translation elongation.eEF5 poly-P/G elongation factor activity.poly-P/G elongation factor (eEF5/eIF5A)