Gene: Solyc06g075780.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g075780.3
- Transcript Identifier Solyc06g075780.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 44780606-44781070 : positive
Gene Family Information
- ID HOM05M001403
- #Genes/#Species 241/43
- Phylogenetic origin
- ID ORTHO05M001410
- #Genes/#Species 227/43
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc06g075780.3.1
- uniprot A0A3Q7H3L6
Descriptions
- Description Zinc finger protein (AHRD V3.3 *** A0A200PZ96_9MAGN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | regulation of transcription, DNA-templated | AT2G37430 AT3G53600 |
| GO:0071289 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | cellular response to nickel ion | AT2G37430 |
| GO:2000022 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | regulation of jasmonic acid mediated signaling pathway | AT3G53600 |
| GO:0071456 | ISO | PLAZA Tree-based Orthology | cellular response to hypoxia | AT3G46090 |
| GO:0010224 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | response to UV-B | AT3G53600 |
| GO:2000280 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | regulation of root development | AT2G37430 |
| GO:1902074 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | response to salt | AT3G53600 |
| GO:1902584 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | positive regulation of response to water deprivation | AT3G53600 |
| GO:0009611 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | response to wounding | AT3G53600 |
| GO:0006970 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | response to osmotic stress | AT3G53600 |
| GO:0009408 | ISO | PLAZA Tree-based Orthology | response to heat | AT5G59820 |
| GO:0009753 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | response to jasmonic acid | AT3G53600 |
| GO:0042631 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | cellular response to water deprivation | AT3G53600 |
| GO:0009414 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | response to water deprivation | AT3G53600 |
| GO:0009409 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | response to cold | AT3G53600 |
| GO:0009643 | ISO | PLAZA Tree-based Orthology | photosynthetic acclimation | AT5G59820 |
| GO:0045926 | ISO | PLAZA Tree-based Orthology | negative regulation of growth | AT3G46090 |
| GO:0042538 | ISO | PLAZA Tree-based Orthology | hyperosmotic salinity response | AT5G59820 |
| GO:0010200 | IBA | GOA Database | response to chitin | |
| GO:0009631 | ISO | PLAZA Tree-based Orthology | cold acclimation | AT5G59820 |
| GO:0009416 | ISO | PLAZA Tree-based Orthology | response to light stimulus | AT5G59820 |
| GO:0006979 | ISO | PLAZA Tree-based Orthology | response to oxidative stress | AT3G46090 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000976 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | transcription cis-regulatory region binding | AT2G37430 AT5G59820 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology, PLAZA Tree-based Orthology | nucleus | AT2G37430 AT3G53600 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.15 | RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF) |