Gene: Solyc06g065470.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g065470.4
  • Transcript Identifier Solyc06g065470.4.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 38506854-38511283 : negative

Gene Family Information

  • ID HOM05M002793
  • #Genes/#Species 134/52
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g065470.4.1
  • uniprot A0A3Q7GYY0

Descriptions

  • Description RNA-binding protein 8A-like (AHRD V3.3 *** A0A2I4G780_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0045927
IEA
GOA Databasepositive regulation of growth
GO:0010628
ISO
PLAZA Integrative Orthologypositive regulation of gene expression AT1G51510

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
InterProRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G51510

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005737
IEA
InterProcytoplasm
GO:0035145
ISO
PLAZA Integrative Orthologyexon-exon junction complex AT1G51510
GO:0016604
ISO
PLAZA Integrative Orthologynuclear body AT1G51510
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G51510
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT1G51510

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR008111 RNA-binding motif protein 8
IPR035979 RNA-binding domain superfamily
IPR033744 RBM8, RNA recognition motif
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
17.3.1.1.3 Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).core components.component Y14