Gene: Solyc06g059780.1
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g059780.1
- Transcript Identifier Solyc06g059780.1.1
- Gene Type Coding gene
- Location SL4.0ch06 : 35357489-35358031 : positive
Gene Family Information
- ID HOM05M010368
- #Genes/#Species 17/1
- Specific Family
- ID ORTHO05M000012
- #Genes/#Species 3139/53
- Specific Family
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc06g059780.1.1
Descriptions
- Description Agamous-like MADS-box protein AGL61 (AHRD V3.3 *** A0A2G2YTX6_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006357 | ISO | PLAZA Homology (enrichment) | regulation of transcription by RNA polymerase II | HOM05M010368 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0000978 | ISO | PLAZA Homology (enrichment) | RNA polymerase II cis-regulatory region sequence-specific DNA binding | HOM05M010368 |
| GO:0000981 | ISO | PLAZA Homology (enrichment) | DNA-binding transcription factor activity, RNA polymerase II-specific | HOM05M010368 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Homology (enrichment) | nucleus | HOM05M010368 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |