Gene: Solyc05g008230.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g008230.3
  • Transcript Identifier Solyc05g008230.3.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 2670026-2674042 : negative

Gene Family Information

  • ID HOM05M000193
  • #Genes/#Species 1156/53
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g008230.3.1
  • uniprot A0A3Q7GDY2

Descriptions

  • Description RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3B5V3_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0031648
ISO
PLAZA Integrative Orthologyprotein destabilization AT1G71020
GO:0090333
ISO
PLAZA Integrative Orthologyregulation of stomatal closure AT1G23030
GO:2000022
ISO
PLAZA Integrative Orthologyregulation of jasmonic acid mediated signaling pathway AT1G71020
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT1G23030
GO:0051865
ISO
PLAZA Integrative Orthologyprotein autoubiquitination AT1G23030

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT1G71020

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000225 Armadillo
IPR003613 U box domain
IPR016024 Armadillo-type fold
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR011989 Armadillo-like helical
Mapman id Description
19.2.2.1.4.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase