Gene: Solyc05g005780.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc05g005780.3
Transcript Identifier Solyc05g005780.3.1
Gene Type Coding gene
Location SL4.0ch05 : 638695-653936 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05M000953
#Genes/#Species 346/53
Phylogenetic origin

ID ORTHO05M003414
#Genes/#Species 126/52
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Solyc05g005780.3.1
uniprot A0A3Q7GBQ6

Descriptions

Short descriptions
Ortholog descriptions

Description AP-1 complex subunit gamma (AHRD V3.3 *** A0A2G2VMC8_CAPBA)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0015031	IEA	GOA Database	protein transport
GO:0006896	IBA	GOA Database	Golgi to vacuole transport
GO:0006898	IBA	GOA Database	receptor-mediated endocytosis
GO:0016192	IEA	GOA Database	vesicle-mediated transport
GO:0016192	IEA	InterPro	vesicle-mediated transport
GO:0006886	IEA	GOA Database	intracellular protein transport
GO:0006886	IEA	InterPro	intracellular protein transport

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G23900
GO:0140312	IBA	GOA Database	cargo adaptor activity
GO:0035615	IBA	GOA Database	clathrin adaptor activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0030121	IBA IEA	GOA Database	AP-1 adaptor complex
GO:0030121	IEA	InterPro	AP-1 adaptor complex
GO:0030117	IEA	GOA Database	membrane coat
GO:0030117	IEA	InterPro	membrane coat
GO:0016020	IEA	GOA Database	membrane
GO:0031410	IEA	GOA Database	cytoplasmic vesicle
GO:0005794	IEA	GOA Database	Golgi apparatus
GO:0005794	IEA	InterPro	Golgi apparatus

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR008152	Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR011989	Armadillo-like helical
IPR013041	Clathrin adaptor, appendage, Ig-like subdomain superfamily
IPR016024	Armadillo-type fold
IPR017107	Adaptor protein complex AP-1, gamma subunit

Mapman id	Description
22.3.1.2.1	Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.large subunit gamma (AP1G)