Gene: Solyc04g077000.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g077000.3
  • Transcript Identifier Solyc04g077000.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 59943105-59945525 : positive

Gene Family Information

  • ID HOM05M000417
  • #Genes/#Species 673/50
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g077000.3.1
  • uniprot A0A3Q7G899

Descriptions

  • Description RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3CPC1_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0006511
IBA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0032436
IBA
GOA Databasepositive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209
IBA
GOA Databaseprotein polyubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity
GO:0031624
IBA
GOA Databaseubiquitin conjugating enzyme binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0000151
IBA
GOA Databaseubiquitin ligase complex
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031127 E3 ubiquitin ligase RBR family
IPR002867 IBR domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.4.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA)