Gene: Solyc04g076180.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g076180.4
  • Transcript Identifier Solyc04g076180.4.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 59112065-59119985 : positive

Gene Family Information

  • ID HOM05M000034
  • #Genes/#Species 3823/53
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g076180.4.1
  • uniprot A0A3Q7G8X0

Descriptions

  • Description ATPase family AAA domain-containing protein (AHRD V3.3 *** A0A2G3CP11_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IBA
GOA Databasepositive regulation of transcription by RNA polymerase II
GO:0031936
IBA
GOA Databasenegative regulation of chromatin silencing
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT1G05910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0003682
IBA
GOA Databasechromatin binding
GO:0042393
IBA
GOA Databasehistone binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036427 Bromodomain-like superfamily
IPR003959 ATPase, AAA-type, core
IPR001487 Bromodomain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR041569 AAA ATPase, AAA+ lid domain
IPR003593 AAA+ ATPase domain
Mapman id Description
12.5.2.6.1 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.BRAT1-BRP1 anti-silencing regulator complex.component BRAT1