Gene: Solyc04g049920.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g049920.4
  • Transcript Identifier Solyc04g049920.4.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 44017380-44019858 : positive

Gene Family Information

  • ID HOM05M000061
  • #Genes/#Species 2603/53
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g049920.4.1
  • uniprot A0A3Q7GVR8

Descriptions

  • Description RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** A0A2U1QNE1_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT3G54770
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G54770
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT3G54770
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G54770

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G54770

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G54770

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
35.1 not assigned.annotated