Gene: Solyc04g047780.1
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc04g047780.1
- Transcript Identifier Solyc04g047780.1.1
- Gene Type Coding gene
- Location SL4.0ch04 : 36885629-36890705 : positive
Gene Family Information
- ID HOM05M000856
- #Genes/#Species 377/53
- Phylogenetic origin
- ID ORTHO05M001026
- #Genes/#Species 285/50
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc04g047780.1.1
- uniprot K4BRK6
Descriptions
- Description Protein ROS1 (AHRD V3.3 *-* A0A2G2Y7I1_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080111 | IEA | GOA Database | DNA demethylation | |
| GO:0080111 | IEA | InterPro | DNA demethylation | |
| GO:0006281 | ISO | PLAZA Homology (enrichment) | DNA repair | HOM05M000856 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019104 | IEA | GOA Database | DNA N-glycosylase activity | |
| GO:0019104 | IEA | InterPro | DNA N-glycosylase activity | |
| GO:0035514 | IEA | GOA Database | DNA demethylase activity | |
| GO:0035514 | IEA | InterPro | DNA demethylase activity | |
| GO:0003824 | ISO | PLAZA Homology (enrichment) | catalytic activity | HOM05M000856 |
| GO:0051747 | ISO | PLAZA Integrative Orthology | cytosine C-5 DNA demethylase activity | Os05g0445900 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |