Gene: Solyc03g033400.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g033400.4
  • Transcript Identifier Solyc03g033400.4.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 4833458-4842782 : positive

Gene Family Information

  • ID HOM05M003660
  • #Genes/#Species 105/52
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g033400.4.1
  • uniprot A0A3Q7FFN7

Descriptions

  • Description Vacuolar protein sorting-associated protein 35 (AHRD V3.3 *** A0A2G3CKZ4_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0015031
IEA
InterProprotein transport
GO:0042147
IBA
IEA
GOA Databaseretrograde transport, endosome to Golgi
GO:0042147
IEA
InterProretrograde transport, endosome to Golgi
GO:0006886
IBA
GOA Databaseintracellular protein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G17790

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030906
IEA
GOA Databaseretromer, cargo-selective complex
GO:0030906
IEA
InterProretromer, cargo-selective complex
GO:0005829
IEA
GOA Databasecytosol
GO:0016020
IEA
GOA Databasemembrane
GO:0030904
IBA
GOA Databaseretromer complex
GO:0005770
IBA
GOA Databaselate endosome
GO:0043231
ISO
PLAZA Integrative Orthologyintracellular membrane-bounded organelle AT3G51310
GO:0010008
ISO
PLAZA Integrative Orthologyendosome membrane AT2G17790
GO:0005771
ISO
PLAZA Integrative Orthologymultivesicular body AT3G51310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005378 Vacuolar protein sorting-associated protein 35
IPR042491 Vacuolar protein sorting-associated protein 35, C-terminal
IPR016024 Armadillo-type fold
Mapman id Description
22.4.2.1.1 Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.Retromer complex.component VPS35