Gene: Solyc02g087250.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g087250.4
  • Transcript Identifier Solyc02g087250.4.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 47708075-47719029 : negative

Gene Family Information

  • ID HOM05M000810
  • #Genes/#Species 394/51
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g087250.4.1
  • uniprot A0A3Q7F9W6

Descriptions

  • Description Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic (AHRD V3.3 *** A0A1J3K6T8_NOCCA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000373
ISO
PLAZA Integrative OrthologyGroup II intron splicing AT3G01370
GO:0000372
ISO
PLAZA Integrative OrthologyGroup I intron splicing AT3G01370

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Zm00001eb424440
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G01370

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009532
ISO
PLAZA Integrative Orthologyplastid stroma AT3G01370

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035920 YhbY-like superfamily
IPR001890 RNA-binding, CRM domain
IPR012349 FMN-binding split barrel
Mapman id Description
16.11.4.1.2 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.splicing factor (CFM2)