Gene: Solyc02g068440.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc02g068440.3
Transcript Identifier Solyc02g068440.3.1
Gene Type Coding gene
Location SL4.0ch02 : 36406656-36409829 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05M004224
#Genes/#Species 93/44
Phylogenetic origin

ID ORTHO05M000075
#Genes/#Species 1593/53
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

tid Solyc02g068440.3.1
uniprot A0A3Q7FM97

Descriptions

Short descriptions
Ortholog descriptions

Description RNA binding protein (AHRD V3.3 *-* B6U487_MAIZE)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	IBA	GOA Database	mRNA splicing, via spliceosome
GO:0016554	ISO	PLAZA Homology (enrichment)	cytidine to uridine editing	HOM05M004224

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003723	IEA	GOA Database	RNA binding
GO:0017069	IBA	GOA Database	snRNA binding
GO:0003729	IBA	GOA Database	mRNA binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005689	IBA	GOA Database	U12-type spliceosomal complex
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT4G20030

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR035979	RNA-binding domain superfamily
IPR000504	RNA recognition motif domain
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily

Mapman id	Description
35.1	not assigned.annotated